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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1AB_SARS2) | H 1 (E) | polymer(polypeptide(L)) [586 aa] | Helicase :R1AB_SARS2 | |
2 | b | G 1 (F) | polymer(polypeptide(L)) [585 aa] | Helicase :R1AB_SARS2 | 5577Y (identity: 100.0 %/98.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7cyq_H_1 identity=98.8% |
queryA 5325:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS:5424 :****************************************************************************************************: 7cyq_H_1 1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100 SecStr : EE TTT SEE EESSSSS B HHHHHHHHTTSS EESSSB S SSS STTEEEETTEEEETTT SS BSEETTEE SS S : ExpBur :eebebbbbebebbbebbebeeebebbbbbbbebbeebebeebbbeeebebebeeeebeebeebebbeebbebeeeeeeeeeebbeeeebebeebeebeee: queryA 5425:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF:5524 :****************************************************************************************************: 7cyq_H_1 101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200 SecStr :S HHHHHHHT S SHHHHHHHHHS SHHHHHHHHHHHHHHHHHHTTS EEEEE STT EEE SS SSTTS EEE B SSSB EEE E: ExpBur :eebeebbebbebebeebebbeebbeeeeebbebbbbbbebeebeeeeebbebbbeeeeeeeebebebeeeeeebebeeeeebbbebeeeeeeeebbebbb: queryA 5525:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP:5624 :*** *********************************************************************************************: 7cyq_H_1 201:EKGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300 SecStr :EE ---- EEE SS TTEEE S SS SS TTS S GGGTTTHHHHTTGGGSSEEEEE TTSSHHHHHHHHHHHST: ExpBur :eee----ebebeeeeeeebeeebbbbbeeeebeebebebbbeeeeeeebeebeeeeeeeeebeebeebbeebbbbbbbbbbbbbebbbbebbbbbbebbe: Contact : b queryA 5625:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG:5724 :************************************ *************************************************************: 7cyq_H_1 301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400 SecStr :T EEEEES TTTHHHHTTTHHHHS STTEEE --- S SEES SS SEEEEETTT B SEEEE TTTS HHHHHHHHHHB SEEEE S: ExpBur :ebbbbbbbeebebbeebbeebeeebeeebbbbbbee---eeebeebeeeeeebebbbbbbeebeeeebbbbbbbbbbebebbbbbbbbebbebebbbbbb: queryA 5725:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL:5824 :****************************************************************************************************: 7cyq_H_1 401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500 SecStr : TTS SS SS STTSSTTTTHHHHT SEE SSS TTTHHHHHTTTSTTT S S SEEB EE SS EE HHHHHHHHHHH: ExpBur :bbbbbebebeebeeeebeebebbbbbebbeeeeeebebbbbebbbebbbebbbeeebeeebeeeeeeeeebbbbeeeeeeeeeeebbebeebbebbeebb: queryA 5825:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP:5917 :*********************************************************************************************: 7cyq_H_1 501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593 SecStr :HS GGGGSSEEE SSTHHHHHHHHHH EE SGGGTT SEEEE STTTS TTSTHHHHTT SSEE B SSSTTT EE : ExpBur :eeeeebeebebbbbbbbbbeebeeebebeebebeebeeeeeeebbbbbbbeeeebbeebbbbbbbbbbebbbbbbbbbeeeeeebebeeeeee: |