[pdbjlvh2]Protein Model on 7cyq_G_1_H

Protein Model on 7cyq_G_1_H_1 (TEMPLATE: 7cyq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1AB_SARS2)	G 1 (F)	polymer(polypeptide(L)) [585 aa]	Helicase :R1AB_SARS2
2	b		H 1 (E)	polymer(polypeptide(L)) [586 aa]	Helicase :R1AB_SARS2	5480E 5488H (identity: 100.0 %/98.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7cyq_G_1 identity=98.8%

queryA      5326:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD:5425
                :****************************************************************************************************:
7cyq_G_1       2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101
SecStr          : EE TTT SEE EEESSSSS  EE HHHHHHHHTTSS   EESSSB S  SSS     STTEEE SSSEEETTT  SS  BSEETTEE  SS S     S:    
ExpBur          :ebebbbbebebbbebbebeeebebbbbbbeebbeebebeebbbeeebebebeeeebeebeebebbeebbebeeeeeeeeeebbeeeebebeebeebeeee:    

queryA      5426:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE:5525
                :****************************************************************************************************:
7cyq_G_1     102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201
SecStr          :  HHHHHHHT  S BHHHHHHHHHS HHHHHHHHHHHHHHHHHHHTTS  EEEEE  STT  EEE  SS     SSTTS EEEEEE SSSEEEEEEE EE:    
ExpBur          :ebeebbebbebebeebebbeebbeeeeebbbbbbbbbebeebeeeeebbebbbeeeeeeeebebebeeeeeebebeeeeebbbebeeeeeeeebbebbbe:    
Contact         :                                                      b       b                                     

queryA      5526:KGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS:5625
                :**    **********************************************************************************************:
7cyq_G_1     202:KGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301
SecStr          :E ---- EEE  SS     TTEEE           S SS      SS TTS   S   GGGTTTHHHHTTGGGSSEEEEE  TTSSHHHHHHHHHHHSTT:    
ExpBur          :ee----ebebeeeeeeebeeebbbbbeeeebeebebebbeeeeeeeebeebeeeeeeeeebeebeebbeebbbbbbbbbbbbbebbbbebbbbbbebbee:    

queryA      5626:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD:5725
                :***********************************   **************************************************************:
7cyq_G_1     302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401
SecStr          :  EEEEES TTTHHHHTTTHHHHS STTEEE    ---  S   SEES SS SEEEEETTT   B  SEEEE   SSS HHHHHHHHHHB  SEEEE S :    
ExpBur          :bbbbbbbeebebbeebbeebeeebeeebbbbbbee---eeebeebeeeeeebebbbbbbeebeeeebbbbbbbbbbebebbbbbbbbebbebebbbbbbb:    

queryA      5726:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT:5825
                :****************************************************************************************************:
7cyq_G_1     402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501
SecStr          :TTT     SS  BS   STTSSTTTTHHHHT  SEE    SSS TTTHHHHHTTTSTTT    S   S SEEB      EE SS EE HHHHHHHHHHHH:    
ExpBur          :bbbbebebeebeeeebeebebbbbbebbeeeeeebebbbbebbbebbbebbbeeebeeebeeeeeeeeebbbbeeeeeeeeeeebbebeebbebbeebbe:    

queryA      5826:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP:5917
                :********************************************************************************************:
7cyq_G_1     502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593
SecStr          :S GGGGSSEEE SSTHHHHHHHHHH   EE SGGGTT   SEEEE     STTTS TTSTHHHHTT SSEE  B   SSSTTT   EE    :    
ExpBur          :eeeebeebebbbbbbbbbeebeeebebeebebeebeeeeeeebbbbbbbeeeebbeebbbbbbbbbbebbbbbbbbbeeeeeebebeeeeee:

Protein Model on 7cyq_G_1_H_1 (TEMPLATE: 7cyq )

Input Residue Numbers for Focused Sites