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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1AB_SARS2) | G 1 (F) | polymer(polypeptide(L)) [585 aa] | Helicase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [187 aa] | Non-structural protein 8 :R1AB_SARS2 | 5377P 5378G (identity: 100.0 %/98.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7cyq_G_1 identity=98.8% |
queryA 5326:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD:5425 :****************************************************************************************************: 7cyq_G_1 2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101 SecStr : EE TTT SEE EEESSSSS EE HHHHHHHHTTSS EESSSB S SSS STTEEE SSSEEETTT SS BSEETTEE SS S S: ExpBur :ebebbbbebebbbebbebeeebebbbbbbeebbeebebeebbbeeebebebeeeebeebeebebbeebbebeeeeeeeeeebbeeeebebeebeebeeee: Contact : bb queryA 5426:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE:5525 :****************************************************************************************************: 7cyq_G_1 102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201 SecStr : HHHHHHHT S BHHHHHHHHHS HHHHHHHHHHHHHHHHHHHTTS EEEEE STT EEE SS SSTTS EEEEEE SSSEEEEEEE EE: ExpBur :ebeebbebbebebeebebbeebbeeeeebbbbbbbbbebeebeeeeebbebbbeeeeeeeebebebeeeeeebebeeeeebbbebeeeeeeeebbebbbe: queryA 5526:KGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS:5625 :** **********************************************************************************************: 7cyq_G_1 202:KGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301 SecStr :E ---- EEE SS TTEEE S SS SS TTS S GGGTTTHHHHTTGGGSSEEEEE TTSSHHHHHHHHHHHSTT: ExpBur :ee----ebebeeeeeeebeeebbbbbeeeebeebebebbeeeeeeeebeebeeeeeeeeebeebeebbeebbbbbbbbbbbbbebbbbebbbbbbebbee: queryA 5626:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD:5725 :*********************************** **************************************************************: 7cyq_G_1 302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401 SecStr : EEEEES TTTHHHHTTTHHHHS STTEEE --- S SEES SS SEEEEETTT B SEEEE SSS HHHHHHHHHHB SEEEE S : ExpBur :bbbbbbbeebebbeebbeebeeebeeebbbbbbee---eeebeebeeeeeebebbbbbbeebeeeebbbbbbbbbbebebbbbbbbbebbebebbbbbbb: queryA 5726:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT:5825 :****************************************************************************************************: 7cyq_G_1 402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501 SecStr :TTT SS BS STTSSTTTTHHHHT SEE SSS TTTHHHHHTTTSTTT S S SEEB EE SS EE HHHHHHHHHHHH: ExpBur :bbbbebebeebeeeebeebebbbbbebbeeeeeebebbbbebbbebbbebbbeeebeeebeeeeeeeeebbbbeeeeeeeeeeebbebeebbebbeebbe: queryA 5826:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP:5917 :********************************************************************************************: 7cyq_G_1 502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593 SecStr :S GGGGSSEEE SSTHHHHHHHHHH EE SGGGTT SEEEE STTTS TTSTHHHHTT SSEE B SSSTTT EE : ExpBur :eeeebeebebbbbbbbbbeebeeebebeebebeebeeeeeeebbbbbbbeeeebbeebbbbbbbbbbebbbbbbbbbeeeeeebebeeeeee: |