CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1AB_SARS2) | C 1 (C) | polymer(polypeptide(L)) [308 aa] | Non-structural protein 3 :R1AB_SARS2 | |
2 | b | M 1 (C) | non-polymer(TTT) | 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide | 1725L 1726G 1727D 1810P 1811P 1827Y 1831Y 1832Q 1836Y 1864T (identity: 100.0 %/97.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7cmd_C_1 identity=97.8% |
queryA 1564:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG:1663 :****************************************************************************************************: 7cmd_C_1 2:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG: 101 SecStr : EEEEEEESSSSS EEEEEETTS HHHHTSSEEETTEE TT STTTT EEEE SHHHHHHHHHHHS TTHHHHHHHHHHHHTTS B SS: ExpBur :eeeebebebbbbeeeeeeeebebeeebeeebbebbeebeebeeeebeeebeeebbbbeeeeeebeebbeebbeeeeeebbbebbebbeebeebebeebee: queryA 1664:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK:1763 :****************************************************************************************************: 7cmd_C_1 102:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK: 201 SecStr :SB TTTHHHHHHHHHHTTS BSSHHHHHHHHHHHTT HHHHHHHHHHTT TT HHHHHHHHHHTB SS EEEEEEEETTTEEEEEEEE: ExpBur :bbbbeeeeebbbbbbbbbbbbbbebebebebbeebbeebeebebbebbbbbbbbbebeeeebbebeebbeebbeebebeebebbbbbeeeeeeeeeeeee: Contact : bbb queryA 1764:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI:1863 :*********************** **********************************************************************: 7cmd_C_1 202:GVEAVMYMGTLSYEQFKKGVQIPXXXXXXXTKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI: 301 SecStr :THHHHEEES S HHHHHH B ------- B EEEEESSEEEEEEEEEEEEEETTS SEEEEEESSTTT EEEEEEESSSEEEEETTEEEEESEEEEEE: ExpBur :bbebbbbeebbebeebbebbeee-------ebbbbbbebbbbbbbbeeeeeebeeeebbbbbbbeeeeeebebebbbbeebbbbbbbeeeeeeeebebbb: Contact : bb b bb b queryA 1864:TDVFYKENSYTTTI:1877 :**************: 7cmd_C_1 302:TDVFYKENSYTTTI: 315 SecStr :EEEEEE SEEE : ExpBur :bbbbbeeeebebee: Contact :b |