Protein Model on 7cmd_C_1_M_1 (TEMPLATE: 7cmd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(R1AB_SARS2) C 1 (C) polymer(polypeptide(L)) [308 aa] Non-structural protein 3 :R1AB_SARS2
2 b M 1 (C) non-polymer(TTT) 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide 1725L 1726G 1727D 1810P 1811P 1827Y 1831Y 1832Q 1836Y 1864T (identity: 100.0 %/97.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7cmd_C_1 identity=97.8%
queryA      1564:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG:1663
                :****************************************************************************************************:
7cmd_C_1       2:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG: 101
SecStr          :   EEEEEEESSSSS EEEEEETTS HHHHTSSEEETTEE TT    STTTT EEEE   SHHHHHHHHHHHS   TTHHHHHHHHHHHHTTS   B SS:    
ExpBur          :eeeebebebbbbeeeeeeeebebeeebeeebbebbeebeebeeeebeeebeeebbbbeeeeeebeebbeebbeeeeeebbbebbebbeebeebebeebee:    

queryA      1664:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK:1763
                :****************************************************************************************************:
7cmd_C_1     102:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK: 201
SecStr          :SB     TTTHHHHHHHHHHTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHTT  TT    HHHHHHHHHHTB  SS EEEEEEEETTTEEEEEEEE:    
ExpBur          :bbbbeeeeebbbbbbbbbbbbbbebebebebbeebbeebeebebbebbbbbbbbbebeeeebbebeebbeebbeebebeebebbbbbeeeeeeeeeeeee:    
Contact         :                                                             bbb                                    

queryA      1764:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI:1863
                :***********************       **********************************************************************:
7cmd_C_1     202:GVEAVMYMGTLSYEQFKKGVQIPXXXXXXXTKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI: 301
SecStr          :THHHHEEES S HHHHHH B   ------- B EEEEESSEEEEEEEEEEEEEETTS SEEEEEESSTTT EEEEEEESSSEEEEETTEEEEESEEEEEE:    
ExpBur          :bbebbbbeebbebeebbebbeee-------ebbbbbbebbbbbbbbeeeeeebeeeebbbbbbbeeeeeebebebbbbeebbbbbbbeeeeeeeebebbb:    
Contact         :                                              bb               b   bb   b                           

queryA      1864:TDVFYKENSYTTTI:1877
                :**************:
7cmd_C_1     302:TDVFYKENSYTTTI: 315
SecStr          :EEEEEE SEEE   :    
ExpBur          :bbbbbeeeebebee:    
Contact         :b                                                                                                   


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