Protein Model on 7c2k_A_1_H_1 (TEMPLATE: 7c2k )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(R1AB_SARS2) A 1 (A) polymer(polypeptide(L)) [927 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b H 1 (A) non-polymer(ZN) ZINC ION 4879C 4963F 5034H 5037C 5038C (identity: 100.0 %/99.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7c2k_A_1 identity=99.8%
queryA      4393:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD:4492
                :****************************************************************************************************:
7c2k_A_1       3:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 102
SecStr          : HHHHHHHHHHHTTS  EEE SS SS    S EEEEEESSS EEEEEE   SB   EEE GGG EEEEE EEE   HHHHHHHHHHHHHHTT SSB    :    
ExpBur          :eeeeeebbeebeeeeeeebeeeeeeeeeebeebbbbeeeeebbbbbebeeeebbbbbbeeeeeeeeebbbbbbeeeeebbeebeebbeebeebebbbebe:    

queryA      4493:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG:4592
                :****************************************************************************************************:
7c2k_A_1     103:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 202
SecStr          :EEEE SSSS EEEEEE S  SSBHHHHHHHHHS  TTS HHHHHHHHHTTS  HHHHHSTTTT SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT:    
ExpBur          :bbeeebeeeebbbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbeeeebbebbeebbeebbebbebbbebbebbeeeb:    

queryA      4593:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN:4692
                :****************************************************************************************************:
7c2k_A_1     203:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 302
SecStr          :EEEE  GGGBBSS  B   SS EE STT  EEE HHHHHHHTHHHHHTTGGGGGGBTTSSTTS B    TT    HHHHHHHHHHH TT  S   SSGGG:    
ExpBur          :bebebbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbee:    

queryA      4693:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA:4792
                :****************************************************************************************************:
7c2k_A_1     303:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 402
SecStr          : SSHHHHHHHHHHHHHHTTSS TTS EEEEEEEEETTEEEEEEEEEEETTTEEEE S    SBS   HHHHHHHHH HHHHHHTSEE   TT SS EEEE:    
ExpBur          :beebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeebbebbbebbbbebbeeeeebebeebebebebb:    

queryA      4793:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK:4892
                :****************************************************************************************************:
7c2k_A_1     403:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 502
SecStr          :SSSS     B   EE HHHHHHHHHTT S TT S     B   B TTHHHHHHGGGGG       HHHHHHHHHHHHHHT S       GGG     TTS:    
ExpBur          :eeeeeeeeebeeeeebeebeebbeeeebbeeeeebeeebebeebeeebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebebbebebeebeeeebee:    
Contact         :                                                                                      b             

queryA      4893:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN:4992
                :****************************************************************************************************:
7c2k_A_1     503:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 602
SecStr          :   BTGGGT  HHHHHHHS HHHHHHHHHHTTTS    EEEEEE    BSS    EEEE  HHHHHHHHHHHHHHHHHHTT SSSSB  S  STTTHHHH:    
ExpBur          :ebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeeebebebebbbbbbbbbebbbbebbeebeeeeebbbbbebebeeebbee:    
Contact         :                                                                      b                             

queryA      4993:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV:5092
                :****************************************************************************************************:
7c2k_A_1     603:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 702
SecStr          :HHHHHTSS SSEEEEE   TTHHHH  HHHHHHHHHHHHTT SSS  HHHHHHHHHHHHHHHTS EEEESSEEEE  S   TT TTHHHHHHHHHHHHHH:    
ExpBur          :bbeebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeeebbbbbbbbbbbbbbbbbbebbbbebebbbbeebebbebbbbbbbbbbbb:    
Contact         :                                         b  bb                                                      

queryA      5093:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW:5192
                :****************************************************************************************************:
7c2k_A_1     703:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 802
SecStr          :HHHHHHHHTS GGG   HHHHHHHHHHHHHHHS  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHHHS    TTS E:    
ExpBur          :bbbbbbbbbbbbeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbbebbeebbbbebebbbbbbbbbbbbbbeeeebb:    

queryA      5193:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML:5292
                :****************************************************************************************************:
7c2k_A_1     803:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 902
SecStr          :EES SSS  S BTTBEEEEEE SSSEEEEEE  HHHHHHHHHEESSGGGGSSTT HHHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeeebeebbeebeebebbebeeeeeebbbbbbebbebbbbbbbbeeeeebebbeebeebbebbbebbbbeebeeeebbebbebbbebbeebbeeeeeeee:    

queryA      5293:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT:5321
                :*******  ********************:
7c2k_A_1     903:DMYSVMLXXDNTSRYWEPEFYEAMYTPHT: 931
SecStr          :HHSS   --   GGGSSTHHHHHTTS   :    
ExpBur          :eeeeeee--eeeeebeeeeebeebbeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123