Protein Model on 7bw4_A_1_B_1
(TEMPLATE: 
7bw4
)Protein Model on 7bw4_A_1_B_1
(TEMPLATE: 7bw4
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(R1AB_SARS2) | A 1 (A) | polymer(polypeptide(L)) [811 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [115 aa] | Non-structural protein 8 :R1AB_SARS2 | 4662L 4663L 4664K 4665Y 4715P 4716T 4717S 4718F 4720P 4721L 4722V 4723R 4724K 4731P 4732F 4736T 4760F 4763L 4764L 4767A 4770P 4771A 4772M 4773H 4774A 4775A 4776S 4777G 4778N 4779L 4780L 4781L 4783K 4794T 4795N 4796N 4797V 4799F 4901W 4906L 4910S 5058M (identity: 100.0 %/97.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7bw4_A_1 identity=97.7% |
queryA 4423:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQR------------:4510
:******************** :
7bw4_A_1 22:VYRAFDIYNDKVAGFAKFLK--------------------------------------------------------------------XXXXXXXXXXXX: 53
SecStr : EEEEEEESSS EEEEEEE --------------------------------------------------------------------------------:
ExpBur :eebbebeeeeebbbbbeeee--------------------------------------------------------------------------------:
queryA 4511:--------------------------------------------------------LTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDW:4554
: ********************************************:
7bw4_A_1 54:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDW: 153
SecStr :-------------------------------------------------------- SSBHHHHHHHHHS TTS HHHHHHHHHTTSS HHHHHSTTS:
ExpBur :--------------------------------------------------------ebebbbbbbbbbbbebeeeebebbeebbeeeebeeeebbeeeeb:
queryA 4555:YDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLT:4654
:****************************************************************************************************:
7bw4_A_1 154:YDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLT: 253
SecStr :S SSSS SHHHHHHHHHHHHHHHTSSHHHHHHHTTTTEEEE GGGBBSSS B S EE TT EEE HHHHHHHGGGGTSS SHHHH STTS TT:
ExpBur :bbbbeeeebeebbbebbeebbebbeebeebbeeeeeebeebebbbbbbbbebebeeeeeeeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeee:
queryA 4655:KPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLH:4754
:****************************************************************************************************:
7bw4_A_1 254:KPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLH: 353
SecStr :S SS HHHHHHHHHHHSTT SS SSGGG SSHHHHHHHHHHHHHHHTTS TTSSEEEEEEEEETTEEEEEEEEEE SSS EEE S TT:
ExpBur :eeeeeeeeeeeebbeebeebbeebbebbeeebbbebeebeebbbbbbbbbbbbbbbebbbeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeee:
Contact : bbbb bbbb bbbbb bb b
queryA 4755:SSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPT:4854
:****************************************************************************************************:
7bw4_A_1 354:SSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPT: 453
SecStr :B HHHHHHHHH SHHHHHSS SS SS B SSSS B EE HHHHHHHHHTT S SS S B B SHHHHHHHHHHHS :
ExpBur :eeeeeeeeebbbebbbbebeeeeeeeebeebebebebbeeeeeeeeebeeeeebeebeeebeeeebeeeeeebeeebebeebebebebebbeebeebbeb:
Contact : b bb b bbbbbbbbbbbb b bbbb b
queryA 4855:MCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSI:4954
:****************************************************************************************************:
7bw4_A_1 454:MCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSI: 553
SecStr : SHHHHHHHHHHHHHTTT TTS TTS TTTTTS HHHHHHHS HHHHHHHHHHHTT EEEEEE S BSSS EEEE H:
ExpBur :bbbbbbbbbbbbbbbebbeebeebebebeeeeeeeeeeebbbbbeeeeebeebbeebeeeebeebbebbeebbbbbbbbbebeeeeeeeeebebebbbbb:
Contact : b b b
queryA 4955:CSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQV:5054
:****************************************************************************************************:
7bw4_A_1 554:CSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQV: 653
SecStr :HHHHHHHHHHHHHHHHHHT SSSSB S STTTHHHHHHHHHHTT SSEEEE TTHHHH HHHHHHHHHHHHHT SSS HHHHHHHHHHHHHHH:
ExpBur :bbbbbbbbbbbebbeebbeeeeebbbbeeeebebbbeebbeebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbb:
queryA 5055:LSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDA:5154
:****************************************************************************************************:
7bw4_A_1 654:LSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDA: 753
SecStr :TS EEE SS EEE S SSSHHHHHHHHHHHHHHHHHHHHHHHHSS TTS SHHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHEEEEEETTEE:
ExpBur :bbbbbbbebbbbebebbbbeeeebbebbbbbbbbbbbbbbbbbbbbeebbeebeeeebbebbbebbeebbeeeeeeeebbeebbebbeebbbbbbeebeb:
Contact : b
queryA 5155:VVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSL:5254
:****************************************************************************************************:
7bw4_A_1 754:VVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSL: 853
SecStr :EEEEEHHHHHHTSS HHHHHHHHHHHHS GGG EES SSS S BTTBEEEEEE SS EEEEEE HHHHHHHHHEE SSSSS HHHHHHHHHHH:
ExpBur :bbbbbbebbeeebbbebebbbbbbbbbbbbbbeeeebbebeebeebbeebeebebbebeeeeeebbbbbbebbebbbbbbbbeeebeeeeeebbeebbeb:
queryA 5255:AIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPH:5320
:********************************* **************:
7bw4_A_1 854:AIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXXXXXXXXXXXXXYWEPEFYEAMYTPH: 919
SecStr :HHHTSGGGGSS HHHHHHHHHHHHHHHHHHHH ------------------- STHHHHGGGS :
ExpBur :bbebbbbeeeeeeeebebbebbbebbeebeeee-------------------eeeeeebeebbeee:
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[assembly_id:1]
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