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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1AB_SARS2) | A 3 (A) | polymer(polypeptide(L)) [348 aa] | Uridylate-specific endoribonuclease :R1AB_SARS2 | |
2 | b | D 3 (A) | non-polymer(WUJ) | N-[(furan-2-yl)methyl]urea | 6604Q 6605P 6606S 6607V 6640Q 6641L 6642P 6643E (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5s6y_A_3 identity=100.0% |
queryA 6453:SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG:6552 :****************************************************************************************************: 5s6y_A_3 4:SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG: 103 SecStr : HHHHHHHHHHHSS S EEEETTEEEEEETTEEEEEEE SSS HHHHHHHHHTB S B HHHHHHTT EESSSB EETTTTEESSSSEES: ExpBur :eeebbbebbeeeebbeeeeeebebeeeeebbebeeeeeeeebbebebeeebebbbbbbbbbbeebbbbbbbbeebebebbbebbbbbeeeebbbbeebbe: queryA 6553:VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNL:6652 :****************************************************************************************************: 5s6y_A_3 104:VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNL: 203 SecStr :S TTTEEESSTTSGGGTTS EEEETTSTTHHHHHHH SSEEEEESS TT EE SEEEETTEEEE SSS EEEEESSSSEE B B S: ExpBur :bbeebeebeebeeeebeeebbbbbebeeebeeebeebebbbbbbeeebeebeebebbebbbeeeeeeeeeeeebebbbbbbeeeeeeebeeeebbbbbeb: Contact : bbbb bbbb queryA 6653:QEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD:6752 :****************************************************************************************************: 5s6y_A_3 204:QEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD: 303 SecStr :TT SHHHHHHHHS HHHHHHHTT TTTTHHHHTT B SSSB B BHHHHHHHHHHS EEEE SS S SEEEEEEEETTT EEEEEEEE B HH: ExpBur :eebeeebebbebbeebeeeebbeebebeebbbeebbbbebeeeebbbbbbbbbbbbeeeebebeeeeeeeebebbbebebebeeeebebeebbbbbbbbe: queryA 6753:DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQ:6798 :**********************************************: 5s6y_A_3 304:DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQ: 349 SecStr :HHHHHHHTS SSEEEEEEEETTEEEEEEEEEETTEEEEEEE : ExpBur :ebbebbeeeebeeeeeebebbbbbeebbbbbebeeeebebbebeee: |