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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1AB_SARS2) | A 1 (B) | polymer(polypeptide(L)) [585 aa] | Helicase :R1AB_SARS2 | |
2 | b | C 1 (B) | non-polymer(VVD) | 5-(acetylamino)-2-fluorobenzoic acid | 5471L 5475I 5509Y 5548Y 5550V 5551L 5552T 5553S (identity: 100.0 %/98.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5rl7_A_1 identity=98.8% |
queryA 5326:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD:5425 :****************************************************************************************************: 5rl7_A_1 2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101 SecStr : EE TTT EES EESSSTT B HHHHHHHHHHSS EESSSEES STT GGGEEEETTEEEETTT SS EESEETTEE S TTS S: ExpBur :eeebbeeebebbbebbebeeebebbbbbbeebbeebebeebbbeeebebebeebeeeebeebebbeeebebeeeeeeeeeebbeeeebebeeeeeeebee: queryA 5426:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE:5525 :****************************************************************************************************: 5rl7_A_1 102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201 SecStr : HHHHHHHH S BHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHTS EEEEEE SSSEEEEEE TTS SSTTS EEEE SS EEE EE: ExpBur :ebeebbebbebebbebebbebbbebeeebbbbbbbbbebebbeeeeebbebebeeeeeebebebebeeeeeebebbeebebbbbbeeeeeeeebeebebe: Contact : b b b queryA 5526:KGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS:5625 :** **********************************************************************************************: 5rl7_A_1 202:KGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301 SecStr :E ---- EEE SS TT EE S SS B SS S SS TTSGGGHHHHHHHHTBSEEEEE TTS HHHHHHHHHHHSTT: ExpBur :ee----ebebeeeeeeebeeebbbebbeeebeebebebbbeeeeeeeeeebeeeeeeeeebeebeebbeebbebbbbbbbbbbebebebbbbbbbebbee: Contact : b bbbb queryA 5626:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD:5725 :*********************************** **************************************************************: 5rl7_A_1 302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401 SecStr : EEEE SSHHHHHHHHHHHHTTS GGGEEE --- SSEES TTSSEEE GGG SEEEEEEEE GGG HHHHHHHHHHEEEEEEEEEE : ExpBur :bbbbbbbeeeebbbebbeebeebbeeeebbbbeee---eebbeebeeeeeebebbbbbbebbbebebebbbbbebbebebbbbbbbbeebebebbbbbbb: queryA 5726:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT:5825 :****************************************************************************************************: 5rl7_A_1 402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501 SecStr :TTS TT BS GGGS HHHHHHHHT SEE EESSS HHHHHHHHHHHSTT EESS S EEEEE EE SS EE HHHHHHHHHHHH: ExpBur :bbbbbbebebeeeeebebebbbbbbeebeeeeeebebeebebbbbbbbebbbebbbeeebeeeeeeeeebbbbeeeeeeeeeeebbbbeebbbbbeebbe: queryA 5826:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP:5917 :********************************************************************************************: 5rl7_A_1 502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593 SecStr :T GGGGG EEEES HHHHHHHHHHH EEEHHHHTT EEEEEEE SHHHH HHHHHHHHTTEEEEEEEEES HHHHHH SEE : ExpBur :eeeebeebbbbbbbbbbbebbeeebebeeeebeebbeeeeebbbbbbbbeeeebbeebbbbbbbbbbeebbbbbbbbeebbeebebeeeeee: |