Protein Model on 5c8u_B_1_A_1
(TEMPLATE: 
5c8u
)Protein Model on 5c8u_B_1_A_1
(TEMPLATE: 5c8u
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(R1AB_SARS2) | B 1 (B) | polymer(polypeptide(L)) [514 aa] | Guanine-N7 methyltransferase :R1AB_CVHSA | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [133 aa] | Non-structural protein 10 :R1AB_CVHSA | 5928N 5929V 5930T 5932L 5933F 5934K 5935D 5944H 5945P 5946T 5947Q 5948A 5949P 5950T 5951H 5952L 5953S 5963L 5964C 5965V 5966D 5972K 5976Y 5980I 5985F 5986K 5987M 5988N 5989Y 5990Q 5991V 5994Y 6027G 6049Y 6051D 6052T 6053P(E) 6054N 6055N 6056T 6117L 6120M 6121K 6124V 6125K 6126I 6142F 6162Y (identity: 97.9 %/93.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5c8u_B_1 identity=93.0% |
queryA 5926:AENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREA:6025
:************* **************** ******************************************************************* *:
5c8u_B_1 2:AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDA: 101
SecStr : STT B B S B TTT SSTTTB GGGEETTEE TTS SS EEE BTTB SB HHHHHHS SSEEEEEEEEEE SSB:
ExpBur :eeeeeeeeeebbeeeebbbeeebeeeeebbeebeeeeeeeeeeeeeeeeebebbbbbeeeeeeeeeeeeeebebeeeebbebbbbbbbbbbbbbebeeeb:
Contact : bbb bbbb bbbbbbbbbb bbbb b b b bbbbbbb b
queryA 6026:VGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVK:6125
:*************************** *** * ** ************************************** ************************:
5c8u_B_1 102:VGTNLPLQLGFSTGVNLVAVPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVFVLWAHGFELTSMKYFVK: 201
SecStr : S EEEEEEEESSS EEE EEEEE SS EEEEE B SSSGGGGGSTHHHH HHHHHHHHHHHHHHHHTTT SS EEEESSHHHHHHHHHHHB :
ExpBur :eebebbbbbbbbeeeebbbbbbbbbebeeeeeeeebeeeebeeeeeeebeebbeebeebeebbeebbebbbeebeeebebbbbbbbeeeebbbbbebbbe:
Contact : b b bbbbbb b bb bb
queryA 6126:IGPERTCCLCDRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWTIEYPIIG:6225
:*********** ******* ******* ** *************************** ******************************** ******:
5c8u_B_1 202:IGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG: 301
SecStr : S B SSSSSB EEETTTTEEE TTT S EESS EEEEGGGG SS HHHHHHHH SSS SHHHHHHHHHHHHHHHHHSS SS S:
ExpBur :ebeeeebeebeebbbbbbeeeeebbbbeebeebbbbbbbbbbbbeeeebeeebeebbeebbeebeeeeebbbbbebbbbbbbeebbeeeeeeeeebeeee:
Contact :b b b
queryA 6226:DELKINAACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYATHSDKFTDGVCLFWNCNVDRYPANSIVCR:6325
:*** * *********** ************************* **************************** ********************* ****:
5c8u_B_1 302:DELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCR: 401
SecStr :SHHHHHHHHHHHHHHHHHHHHHHH SEEEEES SS SSS SSEEEEEESS STTTTTEEE HHHHTTTT SSEEEEES SS SSEEEEE:
ExpBur :ebeebeebbeebbebbbebbbebbebebbbbbebbebeebbeeeebebebbeeeeeeeeeeebeeeebeeeebeeebeeebbbbbebebeebbeebbbbb:
queryA 6326:FDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNM:6425
:************************************ **************** **************************** *******:
5c8u_B_1 402:FDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCEXXXXXXXXXXXYVPLKSATCITRCNLGGAVCRHHANEYRQYLDAYNM: 501
SecStr :E TTS SSEEE TTS EEE SSS EEE GGGGSSSEE B ----------- SSSB S SSS HHHHHHHHHHHHHHHH:
ExpBur :bbbeeebebbbebbeebbbbbbbebebbeebeeebbebbeebebbbbbeeeee-----------eeeeebeebbbbeeeeebebeebbeebeebeeebeb:
queryA 6426:MISAGFSLWVYKQFDTYNLWNTFTR:6450
:********* ***************:
5c8u_B_1 502:MISAGFSLWIYKQFDTYNLWNTFTR: 526
SecStr :HHHTTEEEEE TT GGGGHHHH :
ExpBur :beebbbbbbbbeebeeeebeeeeee:
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[assembly_id:1]
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