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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1AB_SARS2) | A 3 (A) | polymer(polypeptide(L)) [347 aa] | Putative orf1ab polyprotein :Q6VA80_CVHSA | |
2 | b | A 2 (A) | polymer(polypeptide(L)) [347 aa] | Putative orf1ab polyprotein :Q6VA80_CVHSA | 6481N 6498K 6499T 6500T 6542R 6546A 6548I(V) 6692F 6693S 6694H 6695S(G) 6716E(K) 6718E 6720F 6721I 6722P 6723M 6729N 6731F 6733T 6735A 6736Q 6737T 6738G 6740S 6742C 6743V(G) (identity: 85.2 %/88.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2h85_A_3 identity=88.2% |
queryA 6452:QSLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTI:6551 :******* ********** ** ******* ******* *** ************************** ********************* **** ***: 2h85_A_3 2:QSLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIAANTVIWDYKREAPAHVSTI: 101 SecStr : HHHHHHHHHHHSS EEEETTEEEEEETTEEEEEEE SSS HHHHHHHHHTB S B HHHHHHTT EESSSB EETTTTEESSSSEE: ExpBur :eebebbbebbeeeebbeeeeeebebeeeeebbebeeeeeeeeebebebeeebebbbbbbbbbbeebbbbbbbbeebebebbbebbbbbeeeebbbbeebb: Contact : b bbb b b b queryA 6552:GVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRN:6651 :*** ********** * *** ***** *********************** ** ** *** ******** ******* ***** ************ : 2h85_A_3 102:GVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQASVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRD: 201 SecStr :SS TTTEEESSTTSGGGTTS EEEETTSTTHHHHHHH SSEEEEESS BTTB EE S EEETTEEE SSS EEEEEETTEE B : ExpBur :ebbeebeebeebeeeebeeebbbbbebeeebeeebeebebbbbbbeeebeebeebebbebbbeeeeeeeeeeeebebbbbbbeeeeeeebeeeebbbbbe: queryA 6652:LQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLL:6751 :* ******** *********** ******************* ******* ****** ** ************************** ********: 2h85_A_3 202:LEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEHIVYGDFSHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCGCSVIDLLL: 301 SecStr :GGG SHHHHHHHHS HHHHHHHTT TTS HHHHTT B SSSB B BHHHHHHHHHHS EEEEESS S SSEEEEEEETTT EEEEEEEB H: ExpBur :beebeeeeebbebbbebeeeebbeeeebeebbbeebbbbebeeeebbbbbbbbbbbbbeeebebeeeeeeeeeebbbebebebeeeebeeeebbbbbbeb: Contact : bbbb b b bbbb b b b bbbb b bb queryA 6752:DDFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKL:6797 : ************* ********** ********************: 2h85_A_3 302:GDFVEIIKSQDLSVISKVVKVTIDYAEISFMLWCKDGHVETFYPKL: 347 SecStr :HHHHHHHHTS SSSEEEEEEEETTEEEEEEEEEETTEEEEEEE : ExpBur :eebbebbeebeeeeeeeebebebbbbebebbbebeeeebebbebee: |