#WARNING:no index is registered index "YP_009725308.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725308.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7cyq_H_1_G_1

Protein Model on 7cyq_H_1_G_1 (TEMPLATE: 7cyq )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) H 1 (E) polymer(polypeptide(L)) [586 aa] Helicase :R1AB_SARS2
2 b G 1 (F) polymer(polypeptide(L)) [585 aa] Helicase :R1AB_SARS2 253Y (identity: 100.0 %/98.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7cyq_H_1 identity=98.8%
queryA         1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100
                :****************************************************************************************************:
7cyq_H_1       1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100
SecStr          :  EE TTT SEE  EESSSSS  B  HHHHHHHHTTSS   EESSSB S  SSS     STTEEEETTEEEETTT  SS  BSEETTEE  SS S     :    
ExpBur          :eebebbbbebebbbebbebeeebebbbbbbbebbeebebeebbbeeebebebeeeebeebeebebbeebbebeeeeeeeeeebbeeeebebeebeebeee:    

queryA       101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200
                :****************************************************************************************************:
7cyq_H_1     101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200
SecStr          :S  HHHHHHHT  S SHHHHHHHHHS SHHHHHHHHHHHHHHHHHHTTS  EEEEE  STT  EEE  SS     SSTTS EEE  B SSSB   EEE E:    
ExpBur          :eebeebbebbebebeebebbeebbeeeeebbebbbbbbebeebeeeeebbebbbeeeeeeeebebebeeeeeebebeeeeebbbebeeeeeeeebbebbb:    

queryA       201:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300
                :***    *********************************************************************************************:
7cyq_H_1     201:EKGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300
SecStr          :EE ---- EEE  SS     TTEEE           S SS      SS TTS   S   GGGTTTHHHHTTGGGSSEEEEE  TTSSHHHHHHHHHHHST:    
ExpBur          :eee----ebebeeeeeeebeeebbbbbeeeebeebebebbbeeeeeeebeebeeeeeeeeebeebeebbeebbbbbbbbbbbbbebbbbebbbbbbebbe:    
Contact         :                                                    b                                               

queryA       301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400
                :************************************   *************************************************************:
7cyq_H_1     301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400
SecStr          :T  EEEEES TTTHHHHTTTHHHHS STTEEE    ---  S   SEES SS SEEEEETTT   B  SEEEE  TTTS HHHHHHHHHHB  SEEEE S:    
ExpBur          :ebbbbbbbeebebbeebbeebeeebeeebbbbbbee---eeebeebeeeeeebebbbbbbeebeeeebbbbbbbbbbebebbbbbbbbebbebebbbbbb:    

queryA       401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500
                :****************************************************************************************************:
7cyq_H_1     401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500
SecStr          : TTS     SS  SS   STTSSTTTTHHHHT  SEE    SSS TTTHHHHHTTTSTTT    S   S SEEB      EE SS EE HHHHHHHHHHH:    
ExpBur          :bbbbbebebeebeeeebeebebbbbbebbeeeeeebebbbbebbbebbbebbbeeebeeebeeeeeeeeebbbbeeeeeeeeeeebbebeebbebbeebb:    

queryA       501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593
                :*********************************************************************************************:
7cyq_H_1     501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593
SecStr          :HS GGGGSSEEE SSTHHHHHHHHHH   EE SGGGTT   SEEEE     STTTS TTSTHHHHTT SSEE  B   SSSTTT   EE    :    
ExpBur          :eeeeebeebebbbbbbbbbeebeeebebeebebeebeeeeeeebbbbbbbeeeebbeebbbbbbbbbbebbbbbbbbbeeeeeebebeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123