#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7cyq_H_1_B_1

Protein Model on 7cyq_H_1_B_1 (TEMPLATE: 7cyq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) H 1 (E) polymer(polypeptide(L)) [586 aa] Helicase :R1AB_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [187 aa] Non-structural protein 8 :R1AB_SARS2 5325A 5369V 5370N 5391G 5405F 5415G 5416L 5417Y (identity: 100.0 %/98.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7cyq_H_1 identity=98.8%
queryA      5325:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS:5424
                :****************************************************************************************************:
7cyq_H_1       1:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 100
SecStr          :  EE TTT SEE  EESSSSS  B  HHHHHHHHTTSS   EESSSB S  SSS     STTEEEETTEEEETTT  SS  BSEETTEE  SS S     :    
ExpBur          :eebebbbbebebbbebbebeeebebbbbbbbebbeebebeebbbeeebebebeeeebeebeebebbeebbebeeeeeeeeeebbeeeebebeebeebeee:    
Contact         :b                                           bb                    b             b         bbb       

queryA      5425:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF:5524
                :****************************************************************************************************:
7cyq_H_1     101:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 200
SecStr          :S  HHHHHHHT  S SHHHHHHHHHS SHHHHHHHHHHHHHHHHHHTTS  EEEEE  STT  EEE  SS     SSTTS EEE  B SSSB   EEE E:    
ExpBur          :eebeebbebbebebeebebbeebbeeeeebbebbbbbbebeebeeeeebbebbbeeeeeeeebebebeeeeeebebeeeeebbbebeeeeeeeebbebbb:    

queryA      5525:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP:5624
                :***    *********************************************************************************************:
7cyq_H_1     201:EKGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 300
SecStr          :EE ---- EEE  SS     TTEEE           S SS      SS TTS   S   GGGTTTHHHHTTGGGSSEEEEE  TTSSHHHHHHHHHHHST:    
ExpBur          :eee----ebebeeeeeeebeeebbbbbeeeebeebebebbbeeeeeeebeebeeeeeeeeebeebeebbeebbbbbbbbbbbbbebbbbebbbbbbebbe:    

queryA      5625:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG:5724
                :************************************   *************************************************************:
7cyq_H_1     301:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 400
SecStr          :T  EEEEES TTTHHHHTTTHHHHS STTEEE    ---  S   SEES SS SEEEEETTT   B  SEEEE  TTTS HHHHHHHHHHB  SEEEE S:    
ExpBur          :ebbbbbbbeebebbeebbeebeeebeeebbbbbbee---eeebeebeeeeeebebbbbbbeebeeeebbbbbbbbbbebebbbbbbbbebbebebbbbbb:    

queryA      5725:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL:5824
                :****************************************************************************************************:
7cyq_H_1     401:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 500
SecStr          : TTS     SS  SS   STTSSTTTTHHHHT  SEE    SSS TTTHHHHHTTTSTTT    S   S SEEB      EE SS EE HHHHHHHHHHH:    
ExpBur          :bbbbbebebeebeeeebeebebbbbbebbeeeeeebebbbbebbbebbbebbbeeebeeebeeeeeeeeebbbbeeeeeeeeeeebbebeebbebbeebb:    

queryA      5825:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP:5917
                :*********************************************************************************************:
7cyq_H_1     501:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593
SecStr          :HS GGGGSSEEE SSTHHHHHHHHHH   EE SGGGTT   SEEEE     STTTS TTSTHHHHTT SSEE  B   SSSTTT   EE    :    
ExpBur          :eeeeebeebebbbbbbbbbeebeeebebeebebeebeeeeeeebbbbbbbeeeebbeebbbbbbbbbbebbbbbbbbbeeeeeebebeeeeee:    


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