#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [814 aa] | RNA-directed RNA polymerase nsp12 :R1AB_SARS2 | |
2 | b | D 1 (P) | polymer(polyribonucleotide) | DNA/RNA (5'-R(P*CP*UP*AP*CP*GP*CP*G)-D(P*(RMP))-R(P*UP*G)-3') | 4905R 5151S 5152D 5153D 5205C 5206S 5207Q 5228R 5232A 5241K 5250R 5253S 5254L 5257D (identity: 100.0 %/97.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7b3b_A_1 identity=97.8% |
queryA 4423:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQ-------------:4509 :******************** : 7b3b_A_1 34:VYRAFDIYNDKVAGFAKFLK-------------------------------------------------------------------XXXXXXXXXXXXX: 66 SecStr : EEEEEEESSS EEEEEEE --------------------------------------------------------------------------------: ExpBur :eeebbbbeeeebbbbbebee--------------------------------------------------------------------------------: queryA 4510:------------------------------------------------------RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY:4555 : **********************************************: 7b3b_A_1 67:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 166 SecStr :------------------------------------------------------ SSBHHHHHHHHHS BTTB HHHHHHHHHTTSS HHHHHSTTSS: ExpBur :------------------------------------------------------eebebbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeeebb: queryA 4556:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK:4655 :****************************************************************************************************: 7b3b_A_1 167:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 266 SecStr : TTT TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEE B GGGBBTTS B SS EE STT B HHHHHHHHHHHHHTTGGGGGGBGGG SSS: ExpBur :bbbebeebbebbeebbbebbebbeebbebbeebeeebeebbbbbbbbbbebebebeeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeee: queryA 4656:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHS:4755 :************************************************************************************************** : 7b3b_A_1 267:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLXX: 366 SecStr : B TT HHHHHHHHHHHSTT S SSGGG SSHHHHHHHHHHHHHHHTTS SSSSEEEEEEEEETTEEEEEEEEEEETTTEEEE TT --: ExpBur :eeeeeeeeeeebbebbeebbeebbebbebebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeee--: queryA 4756:SRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM:4855 : *************************************************************************************************: 7b3b_A_1 367:XXXSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 466 SecStr :--- HHHHHHHHHSHHHHHHTSEE TT SS EEEESSSS B EE HHHHHHHHHTT S TT S B B TTHHHHHHHGGGG : ExpBur :---eeeeebbbebbbbebeeebeebebeebebebebbeeeeeeeeebeeeeebeebeebbeeeebbeeeeebebebebeebeeebbbebbbebebbbebb: queryA 4856:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC:4955 :****************************************************************************************************: 7b3b_A_1 467:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 566 SecStr : HHHHHHHHHHHHHTTSSS GGG S SSSB TTGGGT BHHHHHHHS HHHHHHHHHHHTTS EEEEEE BSSS EEEE HH: ExpBur :bbbbbbbbbbbbbbebbeebebbebebeebeeeeeeeebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebeeeeebebebebbbb: Contact : b queryA 4956:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL:5055 :****************************************************************************************************: 7b3b_A_1 567:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 666 SecStr :HHHHHHHHHHHHHHHHHT SSSB TT STTTHHHHHHHHHTTT SSEEEEE TTHHHH HHHHHHHHHHHHTT TTT HHHHHHHHHHHHHHTT: ExpBur :bbbbbebbbbebbebbeeeeebbbbbebebeebbbbebbeebbeebeeeebbbbebbbbebbbbbbbbbbbbbbbbeebeeebeeeebbbbbbbbbbbbb: queryA 5056:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV:5155 :****************************************************************************************************: 7b3b_A_1 667:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 766 SecStr :T EEESSSEEEE SS SSSTTHHHHHHHHHHHHHHHHHHHHHHHS SSS HHHHHHHHHHHHHHHT S HHHHHHHHHHHHHHEEEEE SS EE: ExpBur :bbbbbbebbbbbbebbbbeebebeebbbbbbbbbbbbbbbbbbbbbbebeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebb: Contact : bbb queryA 5156:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA:5255 :****************************************************************************************************: 7b3b_A_1 767:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 866 SecStr :EEEEHHHHHHTSS HHHHHHHHHHTT GGG EEES TTT S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSSTTSSSSHHHHHHHHHH: ExpBur :bbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbeeeeeeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebeeeebbeebbebb: Contact : bbb b b b b bb queryA 5256:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT:5321 :********************************* ********************: 7b3b_A_1 867:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXXXXXXXXXXXDNTSRYWEPEFYEAMYTPHT: 932 SecStr :HHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHH ------------- TTHHHHSTHHHHHTTSTT : ExpBur :bebbbbeebeeeebbebbebbbebbeebeeeee-------------eebeeebeeeebeebbeeee: Contact : b |