#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6yyt_A_1_J_1

Protein Model on 6yyt_A_1_J_1 (TEMPLATE: 6yyt )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [853 aa] nsp12 :R1AB_SARS2
2 b J 1 (A) non-polymer(ZN) ZINC ION 4879C 5034H 5037C 5038C (identity: 100.0 %/94.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6yyt_A_1 identity=94.9%
queryA      4423:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYA:4522
                :********************                          *********************                    *************:
6yyt_A_1      34:VYRAFDIYNDKVAGFAKFLKXXXXXXXXXXXXXXXXXXXXXXXXXXFSNYQHEETIYNLLKDCPAVAXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYA: 133
SecStr          : EEEEEEESSS EEEEEEE -------------------------- HHHHHHHHHHHHTSS TTB --------------------   SSBHHHHHHH:    
ExpBur          :eeebbbeeeeebbbbbebee--------------------------eeeeeeeeebeeebeebebbe--------------------eebebbbbbbbbb:    

queryA      4523:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG:4622
                :****************************************************************************************************:
6yyt_A_1     134:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 233
SecStr          :HHS  SS  HHHHHHHHHTTSS GGGGGSTTSS SSS TTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEEE  GGGBBSSS B    S EE STT  :    
ExpBur          :bbbbeeeebeebeebbeebebbeeebbeeeebbbbbeeeebbebbeebbeebbebbbbbbebbebbeebbbebbbbbbbbbbebbbebbeebeeeeeeeb:    

queryA      4623:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV:4722
                :****************************************************************************************************:
6yyt_A_1     234:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 333
SecStr          : EE HHHHHHHHHHHHHHTGGGGGGBTTS SSS B    TT    HHHHHHHHHHHSTT  S   SSGGG SSHHHHHHHHHHHHHHTTTS TTT EEEE:    
ExpBur          :ebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbebebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebe:    

queryA      4723:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK:4822
                :****************************************************************************************************:
6yyt_A_1     334:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 433
SecStr          :EEEEETTEEEEEEEEEEETTTEEEE S    SB    HHHHHHHHH HHHHHHHSEE   SSSSS EEEESSSS            HHHHHHHHHTT S :    
ExpBur          :eebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeebbebbbbbbbbebeeeeeebebeebebebbbbeeeeeeeeebeeeeebeebeebbeeeebee:    

queryA      4823:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY:4922
                :****************************************************************************************************:
6yyt_A_1     434:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 533
SecStr          :TT S     B     GGGHHHHHGGGGG       HHHHHHHHHHHHGGGSSS      GGG   S SSSB  TTGGGT BHHHHHHHS HHHHHHHHHH:    
ExpBur          :eebebebebebeeeeeebbbebbeebebbbebbbbbbbbbbbbbbbbbbbeebeebebebeebeeeebeeebbbbbeeeeebeebbeebeeeebeebbeb:    
Contact         :                                                        b                                           

queryA      4923:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML:5022
                :****************************************************************************************************:
6yyt_A_1     534:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 633
SecStr          :HTTS    EEEEEE    BSSSS  EEEE  HHHHHHHHHHHHHHHHHHHT  SSSB TT  STTTHHHHHHHHHTSS SSEEEEE   TTHHHH  HHH:    
ExpBur          :bbebbbbbbbbbebeeebeeeeeeebebebbbbbbbbbebbbbebbebbeeeeebbbbbeeebbebbbeebbeebbeebeeeebbbbebeebebbbbbbb:    

queryA      5023:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC:5122
                :****************************************************************************************************:
6yyt_A_1     634:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 733
SecStr          :HHHHHHHHHTT SSSS HHHHHHHHHHHHHHTTS EEEETTEEEE  S   SSSTTSHHHHHHHHHHHHHHHHHHHHHTS SSS   HHHHHHHHHHHHH:    
ExpBur          :bbbbbbbbbebbeeebeeeeebbbbbbbbbbbbbbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbbbbbbbbbbebeebeeeebbebbbebbeb:    
Contact         :           b  bb                                                                                    

queryA      5123:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP:5222
                :****************************************************************************************************:
6yyt_A_1     734:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 833
SecStr          :HHT  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHTTSS  HHHHHHHHHHTT     TTS EEES TTT  S SSS EEEEEESSS EEEEE:    
ExpBur          :bbeeeeeeeebbeebeebbeebbbbbbeeeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebeebeebbeebeebbbbebebeeeebbbb:    

queryA      5223:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT:5321
                :***************************************************************************************************:
6yyt_A_1     834:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 932
SecStr          :E  HHHHHHHHH  SSSHHHHSS HHHHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS   STTGGGGGGGSHHHHHGGG TT :    
ExpBur          :bbebbebbbbbbbbeeeeebeeeebbeebbebbbebbbbeebeeeebbebbebbbebbeebbeebbeeeeeeeeeeeeeeebeeebeeeebeebbeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123