#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | F 1 (F) | polymer(polypeptide(L)) [596 aa] | Helicase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [186 aa] | Non-structural protein 8 :R1AB_SARS2 | 5369V 5390G 5391G 5403I 5405F 5414F 5415G 5416L 5417Y 5418K (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6xez_F_1 identity=100.0% |
queryA 5325:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS:5424 :****************************************************************************************************: 6xez_F_1 5:AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGS: 104 SecStr : EE TTT SEE B TTSSS B HHHHHHHHHHSS B SSB S STT GGGEEE SSSEEESSS SS EESEETTEES TTTTT : ExpBur :eebebebbebebbbebeebeeebebbbebbeebbeebebeebbbeeebebebeebeeebbeebebbeebbbbeeeeeeebeebbeeeebebeeeeebebe: Contact : b bb b b bbbbb queryA 5425:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF:5524 :****************************************************************************************************: 6xez_F_1 105:DNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTF: 204 SecStr :STHHHHHHHHH S BHHHHHHHTSS HHHHHHHHHHHHHHHHHHHHTS EEEEE SSSEEEEEE TTS S SSS EEEEE SS EEEEEEEE: ExpBur :eebeebbebeeeebbebebbeebbebeeebbbbbbbbeebeebeeeeebeebebeeeeeeeebbbebeeeeeeeebeeeebbbbeeeeeeeeeebbbbbb: queryA 5525:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP:5624 :****************************************************************************************************: 6xez_F_1 205:EKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP: 304 SecStr :E SSSS EEEEES S SS EEEE S SS B SS SS SS GGGHHHHHHHHHHHHBSEEEEB TTSSTTHHHHHHHHHST: ExpBur :ebbeeeebbbbbbeeeeebeeebebbbeeeebeeeebebbeeeeeeeeeeebeeeeeebeebeebeebbeebbebbbbbbbbbeebebbebbbbbbebbe: queryA 5625:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG:5724 :****************************************************************************************************: 6xez_F_1 305:SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIG: 404 SecStr :TS EEEEESSHHHHHHHHTTTTTSS S SS SS SS SS SSEEEEEGGG S SEEEE TTT HHHHHHHHHH SEEEEE : ExpBur :ebebbbbbeebeebeebbeebeeebeeebbbbbbeeebbbeeeeeeeeeeeebebbbbbbeebeebebbbbbbebbbebebbebbbbbeebebebbbbbb: queryA 5725:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL:5824 :****************************************************************************************************: 6xez_F_1 405:DPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL: 504 SecStr : TTS TT BS GGGT HHHHHHHHT SSB SSBGGGTTTTTTSSS S B S B B SSSS HHHHTTTTTTT: ExpBur :bbbbeebebebbeeeebeeeebbbbbeebeeeebebebeebeebbbebbebbbebebeeebebeeeeeebbbebbebeeeeeeeeebbbeebbebbeeee: queryA 5825:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIPRRN:5920 :************************************************************************************************: 6xez_F_1 505:TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIPRRN: 600 SecStr :TT SS SS EE SSHHHHHHHHHT SS B TTT SS S EE SSSTTTT HHHHHHHHSS SS B S SSHHHHS S B TTS : ExpBur :eebeebeebbbbbbeebbbebbbeeeebebebbeebeeeeeeebbbbbbbeeeebeeebebbbbbbebeebbbbbbebeeeeeebeeeebeeeeee: |