#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 5rlz_A_1_C_1

Protein Model on 5rlz_A_1_C_1 (TEMPLATE: 5rlz )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (B) polymer(polypeptide(L)) [585 aa] Helicase :R1AB_SARS2
2 b C 1 (B) non-polymer(VWM) (3R)-1-acetyl-3-hydroxypiperidine-3-carboxylic acid 5501N 5503N 5809S 5810S 5838P 5839Y 5840N 5878H (identity: 100.0 %/98.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5rlz_A_1 identity=98.8%
queryA      5326:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD:5425
                :****************************************************************************************************:
5rlz_A_1       2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101
SecStr          : EE TTT  EES EESSSTT  B  HHHHHHHHHHSS   EESSSB    STT     GGGEEEETTEEEETTT  SS EESS SSS  SS TTS    S:    
ExpBur          :eeebbeeebebbbebbebeeebebbbbbbeebbeebebeebbbeeebebebeebeeeebeebebbeeebebeeeeeeeeeebbeeeebebeeeeeeebee:    

queryA      5426:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE:5525
                :****************************************************************************************************:
5rlz_A_1     102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201
SecStr          :  HHHHHHHH  S BHHHHHHHHHS HHHHHHHHHHHHHHHHHHTTTS  EEEEE  SSSEEEEEE TTS     STTS EEEEEE SSSEEEEEEE EE:    
ExpBur          :ebeebbebbebebbebebbebbbebeeebbbbbbbbbebebbeeeeebbebebeeeeeebebebebeeeeeebebbeebebbbbbeeeeeeeebeebebe:    
Contact         :                                                                           b b                      

queryA      5526:KGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS:5625
                :**    **********************************************************************************************:
5rlz_A_1     202:KGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301
SecStr          :E ---- EEE  SS     TT EEE          S SS    B SS  S    S   TTTGGGHHHHHHHHTBSEEEEE  TTS HHHHHHHHHHHSTT:    
ExpBur          :ee----ebebeeeeeeebeeebbbebeeeebeebebebbbeeeeeeeeeebeeeeeeeeebeebeeebeebbebebbbbbbbbbbebebbbbbbbebbee:    

queryA      5626:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD:5725
                :***********************************   **************************************************************:
5rlz_A_1     302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401
SecStr          :  EEEE SSHHHHHHHHHHHHTTS GGGEEE    ---     SSEES TTSSEEE  GGG  SEEEEEEEE SGGG  HHHHHHHHHHEEEEEEEEEE :    
ExpBur          :bbbbbbbeeeebbbebbeebeebbeeeebbbbeee---eebbeebeeeeeebebbbbbbebbbebebebbbbbebbebebbbbbbbbeebebebbbbbbb:    

queryA      5726:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT:5825
                :****************************************************************************************************:
5rlz_A_1     402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501
SecStr          :TTS     TT  BS   GGGS HHHHHHHHT  SEE  EESSS HHHHHHHHHHHSTT  EESS   S EEEEE     EEETTEEE HHHHHHHHHHHH:    
ExpBur          :bbbbebebebeeeeebebebbbbbbebbeeeeeebebeebebbbbbbbebbbebbbeeebeeeeeeeeebbbbeeeeeeeeeeebbbbeebbbbbeebbe:    
Contact         :                                                                                   bb               

queryA      5826:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP:5917
                :********************************************************************************************:
5rlz_A_1     502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593
SecStr          :S GGGGG EEEES HHHHHHHHHHH   EEEHHHHTT  EEEEEEE    STTTT HHHHHHHHTTEEEEEEEEES HHHHHH  SEE    :    
ExpBur          :eeeebeebbbbbbbbbbbebbeeebebeeeebeebbeeeeebbbbbbbbeeeebbbebbbbbbbbbbeebbbbbbbbeebbeebebeeeeee:    
Contact         :            bbb                                     b                                               


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