[pdbjlvh2]Protein Model on 2h85_A_3_A

#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 2h85_A_3_A_5

Protein Model on 2h85_A_3_A_5 (TEMPLATE: 2h85 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 3 (A)	polymer(polypeptide(L)) [347 aa]	Putative orf1ab polyprotein :Q6VA80_CVHSA
2	b		A 5 (A)	polymer(polypeptide(L)) [347 aa]	Putative orf1ab polyprotein :Q6VA80_CVHSA	6452Q 6453S 6454L 6455E 6473E 6475P 6476V 6477S 6478I 6486K 6502P 6503V 6504N 6555S(T) 6556M (identity: 93.3 %/88.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2h85_A_3 identity=88.2%

queryA      6452:QSLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTI:6551
                :******* **********  ** ******* ******* *** ************************** ********************* **** ***:
2h85_A_3       2:QSLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIAANTVIWDYKREAPAHVSTI: 101
SecStr          :  HHHHHHHHHHHSS         EEEETTEEEEEETTEEEEEEE  SSS HHHHHHHHHTB  S B  HHHHHHTT  EESSSB EETTTTEESSSSEE:    
ExpBur          :eebebbbebbeeeebbeeeeeebebeeeeebbebeeeeeeeeebebebeeebebbbbbbbbbbeebbbbbbbbeebebebbbebbbbbeeeebbbbeebb:    
Contact         :bbbb                 b bbbb       b               bbb                                               

queryA      6552:GVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRN:6651
                :*** **********  *  *** ***** *********************** ** ** *** ******** ******* *****  ************ :
2h85_A_3     102:GVCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQASVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRD: 201
SecStr          :SS TTTEEESSTTSGGGTTS EEEETTSTTHHHHHHH SSEEEEESS BTTB  EE  S EEETTEEE  SSS    EEEEEETTEE      B      :    
ExpBur          :ebbeebeebeebeeeebeeebbbbbebeeebeeebeebebbbbbbeeebeebeebebbebbbeeeeeeeeeeeebebbbbbbeeeeeeebeeeebbbbbe:    
Contact         :   bb                                                                                               

queryA      6652:LQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLL:6751
                :*  ******** *********** ******************* ******* ******   **  ************************** ********:
2h85_A_3     202:LEDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEHIVYGDFSHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCGCSVIDLLL: 301
SecStr          :GGG    SHHHHHHHHS HHHHHHHTT TTS HHHHTT B SSSB B   BHHHHHHHHHHS EEEEESS S  SSEEEEEEETTT  EEEEEEEB   H:    
ExpBur          :beebeeeeebbebbbebeeeebbeeeebeebbbeebbbbebeeeebbbbbbbbbbbbbeeebebeeeeeeeeeebbbebebebeeeebeeeebbbbbbeb:    

queryA      6752:DDFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKL:6797
                : ************* ********** ********************:
2h85_A_3     302:GDFVEIIKSQDLSVISKVVKVTIDYAEISFMLWCKDGHVETFYPKL: 347
SecStr          :HHHHHHHHTS  SSSEEEEEEEETTEEEEEEEEEETTEEEEEEE  :    
ExpBur          :eebbebbeebeeeeeeeebebebbbbebebbbebeeeebebbebee:

Protein Model on 2h85_A_3_A_5 (TEMPLATE: 2h85 )

Input Residue Numbers for Focused Sites