Protein Model on 5c8s_B_1_A_1
(TEMPLATE: 
5c8s
)Protein Model on 5c8s_B_1_A_1
(TEMPLATE: 5c8s
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [514 aa] | Guanine-N7 methyltransferase :R1AB_CVHSA | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [133 aa] | Non-structural protein 10 :R1AB_CVHSA | 3N 4V 5T 7L 8F 9K 10D 19H 20P 21T 22Q 23A 24P 25T 26H 27L 28S 38L 39C 40V 41D 47K 51Y 55I 60F 61K 62M 63N 64Y 65Q 66V 67N 69Y 101V 102G 124Y 126D 127T 128P(E) 129N 130N 131T 192L 195M 196K 199V 200K 201I 217F (identity: 98.0 %/93.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5c8s_B_1 identity=93.0% |
queryA 1:AENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREA: 100
:************* **************** ******************************************************************* *:
5c8s_B_1 1:AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDA: 100
SecStr : SS B B SS SSS SSTTSS GGGEETTEE TTS S EEE BTTB SB HHHHHHSTTSEEEEEEEEEE SSB:
ExpBur :eeeeeeeeeebbeeeebbbeeebeeeeebbeebeeeeeeeeeeeeeeeeebebbbbbeeeeeeeeeeeeeebebeeeebbebbbbbbbbbbbbbebeeeb:
Contact : bbb bbbb bbbbbbbbbb bbbb b b b bbbbbbbb b
queryA 101:VGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVK: 200
:*************************** *** * ** ************************************** ************************:
5c8s_B_1 101:VGTNLPLQLGFSTGVNLVAVPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVFVLWAHGFELTSMKYFVK: 200
SecStr : S EEEEEEEESSS EEE EEEEE SS EEEEE B S GGGGGGGGGGTS HHHHHHHHHHHHHHHHTTT SS EEEESSHHHHHHHHHHHB :
ExpBur :eebebbbbbbbbeeeebbbbbbbbbebeeeeeebebeeeebeeeeeeebeebbeebeebeebbeebbebbbeebeeebebbbbbbbeeebbbbbbebbbe:
Contact :bb b bbbbbb b bb bb
queryA 201:IGPERTCCLCDRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWTIEYPIIG: 300
:*********** ******* ******* ** *************************** ******************************** ******:
5c8s_B_1 201:IGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG: 300
SecStr : S B TTSSSB EEETTTTEEE TTT S EESS EEEEGGGGT SS HHHHHHHH S S HHHHHHHHHHHHHHHHHSS SS S:
ExpBur :ebbeeebeeeeebbbbbbeeeeeebbbeebeebbbbbbbbbbbbeeeebeeebeebbeeebeeeeeeeebbbbbebbbbbbbeebbeeeeeeeeebeeee:
Contact :b b
queryA 301:DELKINAACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYATHSDKFTDGVCLFWNCNVDRYPANSIVCR: 400
:*** * *********** ************************* **************************** ********************* ****:
5c8s_B_1 301:DELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKIEELFYSYATHHDKFTDGVCLFWNCNVDRYPANAIVCR: 400
SecStr :SHHHHHHHHHHHHHHHHHHHHHHH SEEEEES SS SSS SSEEEEEESS STT SSEEE HHHHTTT SSEEEEES SS SSEEEEE:
ExpBur :ebeebeebbeebbebbbebbbebeebebbbbbebbebeebbeeeebebebbbeebeeeeeeebeeeebeeeebeeebeebbbbbbebebeebbeebbbbb:
queryA 401:FDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNM: 500
:************************************ **************** **************************** *******:
5c8s_B_1 401:FDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCEXXXXXXXXXXXYVPLKSATCITRCNLGGAVCRHHANEYRQYLDAYNM: 500
SecStr : TTS BTTEEE TTS EEE SSS EEE GGGGTTSEE S ----------- SS S SSS HHHHHHHHHHHHHHHH:
ExpBur :bbbeeeeebbbebbeebbbbbbbebebbeebeeebbeebeebeebbbbeeeee-----------eeeeeeeebbbbeeeeeeebeebbeebeebeebbee:
queryA 501:MISAGFSLWVYKQFDTYNLWNTFTR: 525
:********* ***************:
5c8s_B_1 501:MISAGFSLWIYKQFDTYNLWNTFTR: 525
SecStr :HHHTT EEEE TT GGGGGGGS :
ExpBur :beebbbbbbbbeebeeeebeeeeee:
|
[assembly_id:1]
[help]