Protein Model on 7opr_A_1_L_1
(TEMPLATE: 
7opr
)Protein Model on 7opr_A_1_L_1
(TEMPLATE: 7opr
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [218 aa] | Synaptotagmin-like protein 2,Ras-related protein Rab-27A :SYTL2_HUMAN:RB27A_HUMAN | |
| 2 | b | L 1 (A) | non-polymer(05Y) | ~{N}-[1-(2-pyridin-2-ylethyl)benzimidazol-2-yl]propanamide | 10K 79R 80G(D) 81A 82D(M) 111S(Y) 112P(C) (identity: 42.9 %/40.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7opr_A_1 identity=40.9% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD----------DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFK: 97
:* * ********** ** ** * * ** * * * ***** *** ** ** * * * ** * * :
7opr_A_1 46:LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFL: 145
SecStr :EEEEEEE STTSSHHHHHHHHHHS SS SEEEEEEEEEEE BTTBS S EEEEEEEEEEE SGGGHHHHHTTGGG SSEEEEEETT HHHHH:
ExpBur :bbbbbbbbbeebbbeebbebbbeeeeeeeeeebebbebeeeebebeeeeeeeeeeeebebbbbbbbbbbeeebeeebbebbebbebbbbbbbbeeeebbe:
Contact : b bbbb
queryA 98:TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
: * * * * *** *** * * ******** * ** :
7opr_A_1 146:NVRNWISQLQMHAYCENPD---IVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEML: 214
SecStr :THHHHHHHHHHHSSSSS ---EEEEEE TT TTT S HHHHHHHHHHHT EEE TTT TTHHHHHHHH:
ExpBur :ebeebbeebeeebeeeebb---bbbbbbebeeeeeeebeeeebeebbeeeebebbbbbbeeeeebeebbeeb:
Contact : bb
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[assembly_id:1]
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