Protein Model on 5lpn_A_1_B_1
(TEMPLATE: 
5lpn
)Protein Model on 5lpn_A_1_B_1
(TEMPLATE: 5lpn
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [171 aa] | Ras-related protein Rab-10 :RAB10_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [132 aa] | Protein-methionine sulfoxide oxidase MICAL1 :MICA1_HUMAN | 7V(L) 8L 10K 38K(I) 39A(S) 41I 42G 43A(I) 44D 45F 58T(K) 60Q 62W 69R 70F 73L(I) 77F(Y) 79R 80G 82D(M) 115P(N) (identity: 57.1 %/38.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5lpn_A_1 identity=38.0% |
queryA 7:VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF: 106
: * * ******** * *** ** * * *********** **** ** * * * * :
5lpn_A_1 10:LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----: 105
SecStr :EEEEEEEEE TTSSHHHHHHHHHHS SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHTTGGG SEEEEEEETT HHHHHTHHHH----:
ExpBur :eebebbbbbbeebbbeebbebbbeeeeeeeeeeeebbeeeeeebebeeeebebbbbbbbbeeebeeebbeebeebebbbbbbbbeeeebbebbeeb----:
Contact :bb b bb bbbbb b b b bb b b bb b
queryA 107:LIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
:* * **** * * * * ****** ** * ** * * * :
5lpn_A_1 106:LRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK: 175
SecStr :HHHHHHHS TT EEEEEEE TT TT S HHHHHHHHHHHT EEEEEBTTTTBSHHHHHHHHHHHHHHT:
ExpBur :bebbeeebeeebebbbbbbebeeeeeeebeeeebeeebeeeeeebbbbbbeeeeebeebbebbbebbbee:
Contact : b
|
[assembly_id:1]
[help]