Protein Model on 5lef_B_1_M_1
(TEMPLATE: 
5lef
)Protein Model on 5lef_B_1_M_1
(TEMPLATE: 5lef
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [159 aa] | Ras-related protein Rab-6A :RAB6A_HUMAN | |
| 2 | b | M 1 (B) | non-polymer(IPA) | ISOPROPYL ALCOHOL | 22T 23S 34S(D) 36Q(T) 37Y 38K(Q) (identity: 50.0 %/39.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5lef_B_1 identity=39.5% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
: * ** ****** * * * **** *** * ** * * ***** *** ** * * * * * * * * * :
5lef_B_1 10:FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMXXXDRTVRLQLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRT: 109
SecStr : EEEEE STTSSHHHHHHHHHHS SS SEEEEEE --- EEEEEE SGGGGGGSHHHHHH SEEEEEEETT HHHHHHHHHHHHHHHH:
ExpBur :bebbbbbbeebbbeebbeebbeeeeeeeeebbebbeebeeee---eeebebebbbbbbeeebeeebeeebeebbbbbbbbbbbeeebbeebeebbeebee:
Contact : bb b bbb
queryA 109:QASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: *** ** *** * ***** ** * * *:
5lef_B_1 110:ERGS----DVIIMLVGNKTDLADKRQVSIEEGERKA-KELNVMFIETSAKAGYNVKQLFRRVA: 167
SecStr :HHTT----SSEEEEEEE TT GGG S HHHHHHHH-HHHT EEEEEBTTTTBTHHHHHHHHH:
ExpBur :eeee----ebbbbbbbbbbeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbeebe:
|
[assembly_id:1]
[help]