[pdbjlvh2]Protein Model on 5ldd_F_1_E

Protein Model on 5ldd_F_1_E_1 (TEMPLATE: 5ldd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RAB7A_HUMAN)	F 1 (F)	polymer(polypeptide(L)) [158 aa]	Rab small monomeric GTPase-like protein :G0SGE1_CHATD
2	b		E 1 (E)	polymer(polypeptide(L)) [165 aa]	Ccz1 :G0SD94_CHATD	37Y 40T 67Q 68E 69R (identity: 100.0 %/77.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5ldd_F_1 identity=77.8%

queryA         6:KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDE: 105
                :*****************************  *********** ****  * **** *****************************     *  *******:
5ldd_F_1       8:KVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVXXRQVTMQLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDE: 107
SecStr          : EEEEEEEEE TTSSHHHHHHHHS GGG EEEHHHHSEEEEEEEEE -- EEEEEEEEE   GGGGGGHHHHHTT SEEEEEEETT HHHHHTHHHHHHH:    
ExpBur          :eeebbbbbbbeeebebeebbeebbeeeeeeeebeeebbbebeeebee--eebbbebbbbbeeeebeeebeebbeebebbbbbbebeeeebbebbeebbee:    
Contact         :                               b  b                          bbb                                    

queryA       106:FLIQASPRDPENFPFVVLGNK--IDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
                :*******  ********** *       *   *****  * **  *******     *** *** ****** *:
5ldd_F_1     108:FLIQASPXXPENFPFVVLGIKXXXXXXKRVISTKRAQTFCQSKGGIPYFETSXXXXXNVEEAFQVIARNALMQ: 180
SecStr          :HHHHH  -- TT  EEEEEE ------  SS HHHHHHHHHHTT   EEEE ----- HHHHHHHHHHHHHT :    
ExpBur          :beebbee--eeebbbbbbbbe------eeebeeeebeebbeeeeebebbbbe-----ebeebbeebbeebeee:

Protein Model on 5ldd_F_1_E_1 (TEMPLATE: 5ldd )

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