Protein Model on 4q9u_B_1_A_1
(TEMPLATE: 
4q9u
)Protein Model on 4q9u_B_1_A_1
(TEMPLATE: 4q9u
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [153 aa] | Ras-related protein Rab-5A :RAB5A_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [303 aa] | Rab5 GDP/GTP exchange factor :RABX5_HUMAN | 17S 18G(A) 21K 22T(S) 26N(L) 41I 42G 43A 44D(A) 45F 60Q(E) 62W 63D 64T 65A 66G 67Q 69R 70F(Y) 73L 77F(Y) (identity: 66.7 %/42.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4q9u_B_1 identity=42.4% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
: * ** * *** ** **** *** * ** * ********* ** **** * * * * * * :
4q9u_B_1 8:FKLVLLGESAVGKSSLVLRFXXXXXXXXXXSTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR: 107
SecStr : EEEEEE TTSSTTHHHHH ---------- S EE SSSS EE EEEE SSTTTT GGGTSSS SEEEEEEESS HHHHHHHHHHHHHHHH:
ExpBur :bebbbbbbeebbbeeebeee----------eeeeeeeeeeebeeeeeebebebeebebeeeebeeeeeebeebebbebbbbbeeeebbeebeebbeebee:
Contact : bb bb b bbbbb b bbbbbb bb b b
queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
:**** * *** ** * * * ** * ***** ** * ** :
4q9u_B_1 108:QASP----NIVIALSGNKADLANKRAVDFQEAQSYA-DDNSLLFMETSAKTSMNVNEIFMAIAK: 166
SecStr :HS T----T BEEEE TTSGGG S HHHHHHHH-HHTT B TTTT SHHHHHHHHHT:
ExpBur :ebee----ebeebbbbbeeeeeeeeebeeeebeebb-eeeebebeebbbeeeeebeebbeebbe:
|
[assembly_id:1]
[help]