Protein Model on 4lwz_C_1_D_1
(TEMPLATE: 
4lwz
)Protein Model on 4lwz_C_1_D_1
(TEMPLATE: 4lwz
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[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [155 aa] | Ras-related protein Rab-11A :RB11A_HUMAN | |
| 2 | b | D 1 (D) | polymer(polypeptide(L)) [346 aa] | Unconventional myosin-Vb :MYO5B_HUMAN | 8L 30N(R) 32K(E) 42G 43A(V) 45F 46L(A) 47T 58T(K) 60Q 76A (identity: 54.5 %/40.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4lwz_C_1 identity=40.1% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* ** ******* * * * *** * * ** ****** * **** ** * * * * :
4lwz_C_1 11:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAXXXXXXXXTSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 110
SecStr : EEEEEES TTSSHHHHHHHHHHS SS SEEEEEEEEESSS EEEEEEEEE -------- HHHHTT EEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :eebbbbbbbeebbbebbbbbbeeeeeeeeeeebeeeeebeeeeeeeeeebebebbbee--------eeebbeebebbbbbbbbbeeebbebbeeebeebe:
Contact :b b b bb bbb b b b
queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
: * * *** ** * * * * * ** **** *** *****:
4lwz_C_1 111:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 168
SecStr :HHS T----T EEEEEEE TT GGG S HHHHHHHH-HHHT EEEE TTT TTHHHHHHHH:
ExpBur :eebee----ebebbbbbbebbeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbeeb:
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[assembly_id:2]
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