Protein Model on 4fmb_B_1_A_1
(TEMPLATE: 
4fmb
)Protein Model on 4fmb_B_1_A_1
(TEMPLATE: 4fmb
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [171 aa] | Ras-related protein Rab-1A :RAB1A_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [351 aa] | Cysteine protease-like virA :VIRA_SHIFL | 17S 18G 30N(D) 35N(E) 36Q(S) 37Y 38K(I) 39A(S) 40T 41I 42G 43A(V) 44D 45F 46L(K) 47T(I) 58T(K) 60Q 62W 67Q 68E 69R 70F 72S(T) 73L(I) 77F(Y) 94N(E) 129L (identity: 53.6 %/40.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4fmb_B_1 identity=40.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * *********** **** * *** * * * :
4fmb_B_1 6:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID: 105
SecStr :EEEEEEE STTSSHHHHHHHHHTS S S S EEEEEEE SSS EEEEEEE SGGGHHHHHTTTTT SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbbbbbbeebbbeebbbbbeeeeeeeeeeeeeeeeeeeeebebeeeebebebbbbbbeeeebeebbeebeebebbbbbbbbeeeebbebbeebbebbe:
Contact : bb b bbbbbbbbbbbbb b b b bbbb bb b b
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: ** ** *** ** * ** ***** * **** * * *:
4fmb_B_1 106:RYAS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA: 164
SecStr :HHS ----TT EEEEEEE TT TTT S HHHHHHHHHTTT EEEEBTTTTBSHHHHHHHHH:
ExpBur :ebbe----eebbebbbbbebeeeeeeebeeeebeeebeeeebebbbbbbeeeeebeebbeebb:
Contact : b
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[assembly_id:1]
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