Protein Model on 3tnf_A_1_B_1
(TEMPLATE: 
3tnf
)Protein Model on 3tnf_A_1_B_1
(TEMPLATE: 3tnf
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [170 aa] | Ras-related protein Rab-8A :RAB8A_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [379 aa] | LidA :Q5ZWZ3_LEGPH | 10K 34S(N) 36Q(T) 37Y(F) 38K(I) 39A(S) 41I 42G 43A(I) 60Q 62W 67Q 69R 70F 72S(T) 73L(I) 77F(Y) 79R 91T 92A(N) 93P(E) 94N(K) 104D(R) 108I(E) 126K 131N(K) 132R 133Q (identity: 46.4 %/41.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3tnf_A_1 identity=41.9% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******** * *** ** * *********** * **** ** * * * * :
3tnf_A_1 6:LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE: 105
SecStr :EEEEEEE TTSSHHHHHHHHHHS S S EEEEEEEEETTEEEEEEEEE SGGG TTGGGGSTT SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebebbbbbbeebbbeebbebbeeeeeeeeeeebeeeeeeeeebebeeeebebebebbbbeeeeeeebeeebeebebbbbbbbbbeeebbeebeebbeebe:
Contact : b b bbbb bbb b b b bb bb b b bbbb b
queryA 108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172
: ** * * **** * *** * * ***** **** ** * ** :
3tnf_A_1 106:EHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 166
SecStr :HHS T-T EE---EEEEE TT GGG S HHHHHHHHHHH-T EEEE BTTTTBSHHHHHHHHHHH:
ExpBur :eebee-ebbe---bbbbbebebeeeeebeeeebeebbeee-ebebbbbbbeeeeebeebbebbbeb:
Contact :b b bbb
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[assembly_id:1]
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