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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [162 aa] | Ras-related protein Rab-1A :RAB1A_HUMAN | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [316 aa] | DrrA :Q29ST3_LEGPN | 8L 10K 12I(L) 16D 17S 31K(D) 33F(Y) 35N(E) 36Q(S) 37Y 38K(I) 40T 41I 42G 43A(V) 44D 45F 58T(K) 60Q 62W 64T 65A 66G 67Q 68E 69R 70F 76A(S) 80G 81A (identity: 70.0 %/36.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3l0i_B_1 identity=36.5% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * ******* * * *** ** * *********** *** * ** * * * : 3l0i_B_1 33:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSXXRGAHGIIVVYXVTDQESFNNVKQWLQEID: 132 SecStr :EEEEEEE TTS TTTTTSSB HHHHHH SEEEEEEEETTEEEEEEEE TT TT S -- SEEEE - SHHHHHHHHHHHHHH: ExpBur :ebebbbbbeeebebebbbeebeeeeeeeeeeeeeeeebbbeeeebeeeebbbbbeeeeebeeeeeeeee--eebebbbbbb-beeeebbeebbebbeebe: Contact :b b b bb b b bbbb bbbbbb b b b bbbbbbb b bb queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170 : * ** ** ** * ** *** * **** * * *: 3l0i_B_1 133:RYAX----ENVNKLLVXNKCDLTXXKVVDYTTXKEFADSLGIPFLETSXXXATNVEQSFUTUA: 191 SecStr :S ----- SEEEE - SS -- S - HHHHTTT B --- HHHHHHHHHHT: ExpBur :eee-----eeebbbbb-bbeeee--eebeeee-ebebeeeebebeebe---eeebbeebbebb: |