Protein Model on 3gj3_A_1_B_1
(TEMPLATE: 
3gj3
)Protein Model on 3gj3_A_1_B_1
(TEMPLATE: 3gj3
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [202 aa] | GTP-binding nuclear protein Ran :RAN_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [27 aa] | Nuclear pore complex protein Nup153 :NU153_RAT | 8L(Q) 10K 36Q(K) 37Y 38K(V) 40T 41I(L) 45F(V) 58T(K) 60Q(N) 62W 76A(G) 79R(I) 80G(Q) (identity: 28.6 %/34.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3gj3_A_1 identity=34.0% |
queryA 6:KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDE: 105
: * * ** * *** * * ** * ******* * * * * * **** * * * :
3gj3_A_1 13:QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRD: 112
SecStr : EEEEEEEE TTSSHHHHHTTBHHHHHT EEETTTTEEEEEEEEEETTEEEEEEEEEE SGGGSS HHHHTT EEEEEEETT HHHHHTHHHHHHH:
ExpBur :eeebbbbbbbbeebbbeebbebbeebeeeeeeeeebbbebbbbebebeeeebbbbbbbbebebeeeebeeebbeebebbbbbbbbeeeebbeebeebbeb:
Contact : b b bbb bb b b b b b bb
queryA 106:FLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
: * ** * * *** * * * * * * * *** * * * ** :
3gj3_A_1 113:LV-----RVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLI: 174
SecStr :HH-----HHH S EEEEEE TTSSS SS GGG --TTGGGT EEEE BGGGTBTTHHHHHHHHHHHH:
ExpBur :be-----ebbeebebbbbbbebeeeebebebeebe--bbeeeebebbbbbbebbbbbeebbbbbbeeee:
|
[assembly_id:1]
[help]