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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [176 aa] | Ras-related protein Rab-3D :RAB3D_HUMAN | |
2 | b | D 1 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | 32K(S) 33F (identity: 50.0 %/35.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2gf9_A_1 identity=35.4% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 : * * * ***** * * * * ** * * * ********** * **** * * * * : 2gf9_A_1 22:MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDW----A: 117 SecStr :EEEEEEE STTSSHHHHHHHHHHS S EEEEEEEEETTEEEEEEEEE S SS SGGGGGTT SEEEEEEETT HHHHHTHHHH----H: ExpBur :ebbbbbbbeeebbbeebbebbbeeeeeeeeeeeeeeeeeeeebeeeebebebebbbbbeeeeeeeebbeebeebbbbbbbbbbeeeebbebbeeb----b: Contact : bb queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169 : * * *** *** * ** **** *** * * : 2gf9_A_1 118:TQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERL: 179 SecStr :HHHHHHS TT EEEEEEE TT GGG S HHHHHHHHHHHT EEEE BTTTTBSHHHHHHHH: ExpBur :ebbeeebeeebbbbbbbbebeeeeeeebebeebeebbeeeebebebbbbeeeeebbebbeeb: |