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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [165 aa] | Ras-related protein Rab-5C :RAB5C_MOUSE | |
2 | b | C 1 (A) | non-polymer(PO4) | PHOSPHATE ION | 15G 17S 21K 65A 66G 67Q(L) 68E (identity: 85.7 %/44.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1z0d_A_1 identity=44.3% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108 : * ** * *** ** * * **** *** * ** * ****** ** ** **** * * * ** * * : 1z0d_A_1 6:FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQR: 105 SecStr :EEEEEE STTSSHHHHHHHHHHS S SEEEEEEEEEEETTEEEEEEEEEEE TTT GGGTHHHHTT SEEEEEEETT HHHHHHHHHHHHHHHH: ExpBur :bbbbbbbeeebbbebbbbebeeeeeeeeeeeeeeeeebeeebeeeeeebebebebbebbeeeeeebeebbeebebbbbbbbbeeeebbeebeebbebbee: Contact : b b b bbbb queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 :**** * *** ** * * *** * ***** * ** * ** : 1z0d_A_1 106:QASP----NIVIALAGNKADLASKRAVEFQEAQAYA-DDNSLLFMETSAKTAMNVNEIFMAIAK: 164 SecStr :HS T----T EEEEEEE GGGGGG S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHHHH: ExpBur :ebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebebebbbbeeeeebeebbbbbbe: |