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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [175 aa] | GTP-binding protein :RAB4A_HUMAN | |
2 | b | A 2 (A) | polymer(polypeptide(L)) [175 aa] | GTP-binding protein :RAB4A_HUMAN | 41I 42G 43A(V) 45F 60Q 62W 69R 73L(V) 77F(Y) (identity: 66.7 %/39.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1yu9_A_1 identity=39.0% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * * * ** * * *** *** * * * * *********** * **** ** * * * * * *: 1yu9_A_1 11:LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNW----L: 106 SecStr :EEEEEEEESTTSSHHHHHHHHHHSS TT SSEEEEEEEEEETTEEEEEEEEEE SGGGHHHHGGGGTT EEEEEEETT HHHHHTHHHH----H: ExpBur :ebebbbbbbeebbbbbbbebbeeeeeeeeeeebebeeebeeebebeeeebbbebebbbbeeebeeebbebbeebebbbbbbbbbeeebbebbeeb----b: Contact : bbb b b b b b b queryA 108:IQASPRDPENFPFVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176 : * * *** ** * * * * **** ** ** ** * : 1yu9_A_1 107:TDARMLASQNIVIILCGNKKDLDADREVTFLEASRFA-QENELMFLETSALTGEDVEEAFVQCARKILNK: 175 SecStr :HHHHHHS TT EEEEEEE TT GGG S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHHHHHHH : ExpBur :eebeeebeeebbbbbbbbeeeeeeeeebeeeebeebb-eeeebeebbbbbeeeeebeebbeebbeeebee: |