[pdbjlvh2]Protein Model on 1ky2_A_1_B

Protein Model on 1ky2_A_1_B_1 (TEMPLATE: 1ky2 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RAB7A_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [180 aa]	GTP-BINDING PROTEIN YPT7P :YPT7_YEAST
2	b		B 1 (A)	non-polymer(MG)	MAGNESIUM ION	22T 40T (identity: 100.0 %/70.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1ky2_A_1 identity=70.1%

queryA         3:SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDS: 101
                :****  *****************  *** * * *************** ** *   *** ************************** ***    *    *:
1ky2_A_1       3:SRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKS: 102
SecStr          :      EEEEEE  TTS HHHHHHHHHHS   S      SEEEEEEEEEETTTEEEEEEEEEE  SGGG TTTTGGGTT SEEEEEEETT HHHHHTHHH:    
ExpBur          :eeeeeebbbbbbbbeebbbbbbbebbbeeeeeeeeeeeebbeeeeeebebeeeeebbbbbbbbbbeeebeeeeeebbeebbbbbbbbbbeeeebbeebee:    
Contact         :                   b                 b                                                              

queryA       102:WRDEFLIQASPRDPENFPFVVLGNKIDLENRQ--VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
                :******  *    ** **** ****** *     *  * **    *   ** * **** ****  **  *** ** *:
1ky2_A_1     103:WRDEFLVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ: 179
SecStr          :HHHHHHHHS  S TTTS EEEEEE TTS TTT  S HHHHHHHHHHTTS  EEEEBTTTTBSHHHHHHHHHHHHHHH:    
ExpBur          :beeebbeebebeeeeebbbbbbbbeeebeeeeeebeeeebeebbeebeebebbbbbbeeeeebeebbeebbebbbee:

Protein Model on 1ky2_A_1_B_1 (TEMPLATE: 1ky2 )

Input Residue Numbers for Focused Sites