[pdbjlvh2]Protein Model on 8hfv_A_1_L

Protein Model on 8hfv_A_1_L_1 (TEMPLATE: 8hfv )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [220 aa]	Procathepsin L :CATL1_HUMAN
2	b		L 1 (A)	non-polymer(CAC)	CACODYLATE ION	250D 252G 253H 273D 275D (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8hfv_A_1 identity=100.0%

queryA       114:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :****************************************************************************************************:
8hfv_A_1       1:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 100
SecStr          :  S EETTTTT      B  SSB HHHHHHHHHHHHHHHHHHS    B HHHHHHH TTTT  TTB   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeeebebeeeebbbebbebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbeebebebbeeeebbebbebbeeeebbbbbeebebeeeeeeeeb:    

queryA       214:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 313
                :****************************************************************************************************:
8hfv_A_1     101:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 200
SecStr          : GGGEEE  S EEE  S HHHHHHHHHHT SEEEEE   SHHHHT  SSEE  TT  SS   EEEEEEEEEEEE SS EEEEEEEE SB TTSTBTTEEE:    
ExpBur          :eeeeeebebebeeebeeebebbbebbbebbbbbbbbbbeeeebeebeeeebebeebeeeeeebbbbbbbbbeeeeeeeeeebbbbbbbebeebeeebbbb:    
Contact         :                                    b bb                   b b                                      

queryA       314:MAKDRRNHCGIASAASYPTV: 333
                :********************:
8hfv_A_1     201:MAKDRRNHCGIASAASYPTV: 220
SecStr          :EE SSSSGGGTTTT EEE  :    
ExpBur          :bbbeeebbbbbbbebbbbee:

Protein Model on 8hfv_A_1_L_1 (TEMPLATE: 8hfv )

Input Residue Numbers for Focused Sites