[pdbjlvh2]Protein Model on 8c77_B_1_K

Protein Model on 8c77_B_1_K_1 (TEMPLATE: 8c77 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [220 aa]	Cathepsin L :CATL1_HUMAN
2	b		K 1 (B)	non-polymer(DMS)	DIMETHYL SULFOXIDE	188Q (identity: 100.0 %/99.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8c77_B_1 identity=99.5%

queryA       114:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :****************************************************************************************************:
8c77_B_1       1:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 100
SecStr          :  S EEGGGGT      B TTSS HHHHHHHHHHHHHHHHHHS    B HHHHHHH GGGT  GGG   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeeebbbeeeebbbeebebeebebbbbbbbbbbbbbbbbeeeeeeeebbbbbbbbbbeebebebeeeeebbebbebbeeeebbbbbeebeeeeeeeeeee:    
Contact         :                                                                          b                         

queryA       214:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 313
                :********* ******************************************************************************************:
8c77_B_1     101:NPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 200
SecStr          : GGGEEE  S EEE  S HHHHHHHHHHT SEEEEE   SHHHHT  SSEE  TT  SS   EEEEEEEEE SSTT  TT EEEEE SB SSSTBTTEEE:    
ExpBur          :eeeeeebebebeeebeeebeebeebbbebbbbbbbbbbeeeebeebeeeebebeebeeeeeebbbbbbbbbeeeeebeeeeebbbbbbebeebbeebbbe:    

queryA       314:MAKDRRNHCGIASAASYPTV: 333
                :********************:
8c77_B_1     201:MAKDRRNHCGIASAASYPTV: 220
SecStr          :EE SSSSGGGTTTT EEE  :    
ExpBur          :bbbeeebbbbbbeebbbbee:

Protein Model on 8c77_B_1_K_1 (TEMPLATE: 8c77 )

Input Residue Numbers for Focused Sites