[pdbjlvh2]Protein Model on 8c77_A_1_E

Protein Model on 8c77_A_1_E_1 (TEMPLATE: 8c77 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [220 aa]	Cathepsin L :CATL1_HUMAN
2	b		E 1 (A)	non-polymer(TXH)	~{tert}-butyl ~{N}-[(2~{S})-3-(1~{H}-indol-3-yl)-1-(2-methanoylhydrazinyl)-1-oxidanylidene-propan-2-yl]carbamate	132Q 136G 137S 138C 139W 176E 179N 180G 181G 182L 183M 248A 274M 275D 276H 327A (identity: 100.0 %/99.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8c77_A_1 identity=99.5%

queryA       114:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :****************************************************************************************************:
8c77_A_1       1:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 100
SecStr          :  S EEGGGGT      B TTSS HHHHHHHHHHHHHHHHHHS    B HHHHHHH GGGT  GGG   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeeebebeeeebbbebbebeebebbbbbbbbbbbbbbbbeeeeeeeebbbbbbbbbbeebebebbeeeebbebbebbeeeebbbbbeebebeeeeeeeeb:    
Contact         :                  b   bbbb                                    b  bbbbb                              

queryA       214:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 313
                :********* ******************************************************************************************:
8c77_A_1     101:NPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 200
SecStr          : GGGEEE  S EEE  SSHHHHHHHHHHT  EEEEE   SHHHHT  SSEE  TT  SS   EEEEEEEEEE   TTS  EEEEEE SB TTSTBTTEEE:    
ExpBur          :eeeeeebebebeeebeeebebbbebbbebbbbbbbbbbebeebeebeeeebebeebeeeeeebbbbbbbbbeeeeeeeeeebbbbbbbebeebeeebbbb:    
Contact         :                                  b                         bbb                                     

queryA       314:MAKDRRNHCGIASAASYPTV: 333
                :********************:
8c77_A_1     201:MAKDRRNHCGIASAASYPTV: 220
SecStr          :EE SSSSGGGTTTS EEE  :    
ExpBur          :bbbeeebbbbbbbebbbbee:    
Contact         :             b

Protein Model on 8c77_A_1_E_1 (TEMPLATE: 8c77 )

Input Residue Numbers for Focused Sites