[pdbjlvh2]Protein Model on 6yyo_B_1_AA

Protein Model on 6yyo_B_1_AA_1 (TEMPLATE: 6yyo )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	B 1 (BBB)	polymer(polypeptide(L)) [220 aa]	Cathepsin S :CATS_HUMAN
2	b		AA 1 (BBB)	non-polymer(EDO)	1,2-ETHANEDIOL	289E(D) 291D(N) 292N(G) (identity: 0.0 %/57.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6yyo_B_1 identity=57.5%

queryA       115:PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ-GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :* ******** ** ** ** ** ****** **** *   *** * *** *******    ** ***** *  ****  ** * **  **** *    * *:
6yyo_B_1       4:PDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQY: 103
SecStr          : S EEGGGGT      B TTS  HHHHHHHHHHHHHHHHHHS    B HHHHHHHS GGGT  GGG   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeebbbeeeebbbebbebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbeeeeebebbeeeebeebbebbeeeebbbbeeebebeeeeeeeee:    

queryA       214:NPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV: 312
                :  **  *        *   *  *  ***  ** **  ** * **  *  * * ** *      *********          *********   *  ** :
6yyo_B_1     104:DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC-TQNVNHGVLVVGYG----DLNGKEYWLVKNSWGHNFGEEGYI: 198
SecStr          : GGGEEE   EEEE  TT HHHHHHHHHHT  EEEEE   SHHHHT  SS B  TT - S   EEEEEEEEE----EETTEEEEEEE SB TTSTBTTEE:    
ExpBur          :eeeeeebebeeeeebeebebeebeebbbeebbbbbbbbbebeebeebeeeebebeeb-eeeeebbbbbbbbb----eeeeeebbbbbbbebeebbeebbb:    
Contact         :                                                                            b bb                    

queryA       313:KMAKDRRNHCGIASAASYPTV: 333
                : **    *******  ***  :
6yyo_B_1     199:RMARNKGNHCGIASFPSYPEI: 219
SecStr          :EEESSSSSGGGTTTS EEEE :    
ExpBur          :ebbbeeebbbbbbbebbbbbb:

Protein Model on 6yyo_B_1_AA_1 (TEMPLATE: 6yyo )

Input Residue Numbers for Focused Sites