Protein Model on 4axl_A_1_D_1 (TEMPLATE: 4axl )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(CATL1_HUMAN) A 1 (A) polymer(polypeptide(L)) [220 aa] CATHEPSIN L1 :CATL1_HUMAN
2 b D 1 (A) non-polymer(ACT) ACETATE ION 318R 319R (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4axl_A_1 identity=100.0%
queryA       114:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :****************************************************************************************************:
4axl_A_1       1:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 100
SecStr          :  S EETTTTT      B  SSS HHHHHHHHHHHHHHHHHHS    B HHHHHHH GGGT  GGG   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeeebbbeeeebbbebbebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbeebebebbeeeebbebbebbeeeebbbbbeebeeeeeeeeeeb:    

queryA       214:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 313
                :****************************************************************************************************:
4axl_A_1     101:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 200
SecStr          : GGGEEE  SEEEE  SSHHHHHHHHHHH SEEEEE   SHHHHT  SSEE  TT  SSS  EEEEEEEEEE TT SSS EEEEEE SB TTSTBTTEEE:    
ExpBur          :eeeeeebebebeeebeeebebbbebbbebbbbbbbbbbebeebeebeeeebebeebeeeebebbbbbbbbbeeeeeeeeeebbbbbbbebeebeeebbbb:    

queryA       314:MAKDRRNHCGIASAASYPTV: 333
                :********************:
4axl_A_1     201:MAKDRRNHCGIASAASYPTV: 220
SecStr          :EE SSSSGGGTTTT EEEE :    
ExpBur          :bbbeeebbbbbbbebbbbee:    
Contact         :    bb                                                                                              


Input Residue Numbers for Focused Sites

ex) 2,15,123