[pdbjlvh2]Protein Model on 3ovz_A_1_B

Protein Model on 3ovz_A_1_B_1 (TEMPLATE: 3ovz )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [213 aa]	Cathepsin K :CATK_HUMAN
2	b		B 1 (A)	non-polymer(O96)	N-[(1S)-3-amino-1-ethyl-2,3-dioxopropyl]-2-chloro-4-(pyridin-2-ylmethoxy)-3-(trifluoromethyl)benzamide	132Q 135C 136G 137S 138C 139W 180G 181G 182L(Y) 248A 274M(L) 275D(N) 276H 277G(A) 302W 327A(L) (identity: 68.8 %/60.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3ovz_A_1 identity=60.2%

queryA       117:SVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPK: 216
                :*** * ********************  ******   *** *  ** ******     * ** ** *  ****** * * ***  ***   **** *** :
3ovz_A_1       2:SVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPT:  99
SecStr          : EEGGGGT      B  SS  HHHHHHHHHHHHHHHHHHS    B HHHHHHH TT--S GGG   HHHHHHHHHHTT EEBTTTS   SS       GG:    
ExpBur          :ebbbeeeebbbebeebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbee--bebeeeeebbbbbebbeebebbbbeeebeeeeeeeeeebeee:    
Contact         :               b  bbbbb                                        bbb                                  

queryA       217:YSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMA: 315
                :   *   *   **   ****  *** *** ******   ** **  * *    * *    * ** ****        ** *  ****** **  **  **:
3ovz_A_1     100:GKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQK----GNKHWIIKNSWGENWGNKGYILMA: 195
SecStr          :GEEE    EEE  TT HHHHHHHHHHT  EEEEE   SHHHHT  SSEE  TT  TT   EEEEEEEEEEET----TEEEEEEE SB TTSTBTTEEEEE:    
ExpBur          :eeebebebeeebeeeebebbeebbeebbbbbbbbbbeeeebeebeeeebeeeebeeeeeebbbbbbbbbeee----eeebbbbbbbebeebeeebbbbbb:    
Contact         :                                b                         bbbb                        b             

queryA       316:KDRRNHCGIASAASYPTV: 333
                :    * ****  ** *  :
3ovz_A_1     196:RNKNNACGIANLASFPKM: 213
SecStr          :SSSSSGGGTTSS EEE  :    
ExpBur          :beeebbbbbbbebbbbee:    
Contact         :           b

Protein Model on 3ovz_A_1_B_1 (TEMPLATE: 3ovz )

Input Residue Numbers for Focused Sites