[pdbjlvh2]Protein Model on 3kse_A_1_D

Protein Model on 3kse_A_1_D_1 (TEMPLATE: 3kse )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [220 aa]	Cathepsin L1 :CATL1_HUMAN
2	b		D 1 (D)	polymer(polypeptide(L)) [98 aa]	Cystatin-A :CYTA_HUMAN	131N 132Q 133G 134Q 135C 136G 138C(U) 139W 178C 179N 180G 181G 182L 257L 258F 274M 275D 276H 277G 302W 305E (identity: 95.2 %/98.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3kse_A_1 identity=98.6%

queryA       114:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :************************ ***************************************************************************:
3kse_A_1       1:APRSVDWREKGYVTPVKNQGQCGSUWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 100
SecStr          :  S EEGGGGT      B TTSB HHHHHHHHHHHHHHHHHHS    B HHHHHHH GGGT  TTB   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeeebbbeeeebbbebbebeebebebbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbeebebebbeeeebbebbebbeeeebbbbbeebeeeeeeeeeeb:    
Contact         :                 bbbbbb bb                                      bbbbb                               

queryA       214:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 313
                :********* ******************************************************************** *********************:
3kse_A_1     101:NPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDDNKYWLVKNSWGEEWGMGGYVK: 200
SecStr          : GGGEEE  S EEE  SSHHHHHHHHHHT SEEEEE   SHHHHT  SSEE  TT  SS   EEEEEEEEEE   TTS  EEEEEE SB SSSTBTTEEE:    
ExpBur          :eeeeeebebebeeebeeebebbeebbbebbbbbbbbbbebeebeebeeeebebeebeeeeeebbbbbbbbbeeeeeeeeeebbbbbbbebeebbeebbbb:    
Contact         :                                           bb               bbbb                        b  b        

queryA       314:MAKDRRNHCGIASAASYPTV: 333
                :********************:
3kse_A_1     201:MAKDRRNHCGIASAASYPTV: 220
SecStr          :EE SSSSGGGTTTT EEE  :    
ExpBur          :bbbeeebbbbbbbebbbbee:

Protein Model on 3kse_A_1_D_1 (TEMPLATE: 3kse )

Input Residue Numbers for Focused Sites