[pdbjlvh2]Protein Model on 3kfq_A_1_D

Protein Model on 3kfq_A_1_D_1 (TEMPLATE: 3kfq )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [221 aa]	Cathepsin L2 :CATL2_HUMAN
2	b		D 1 (D)	polymer(polypeptide(L)) [98 aa]	Cystatin-A :CYTA_HUMAN	131N 132Q 133G(K) 134Q 135C 136G 138C(U) 139W 178C 179N 180G 181G 182L(F) 257L(Q) 258F 274M(L) 275D 276H 277G 302W (identity: 75.0 %/79.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3kfq_A_1 identity=79.5%

queryA       115:PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN: 214
                :* ***** ********** **** ****************** * *********** **** ***** *  *****  ************ *  * *** :
3kfq_A_1       2:PKSVDWRKKGYVTPVKNQKQCGSUWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYR: 101
SecStr          : S EEGGGGT      B TTSB HHHHHHHHHHHHHHHHHHS    B HHHHHHH TTTT  TTB   HHHHHHHHHHHT EEBTTTS   SS       :    
ExpBur          :eeebbbeeeebbbebbebeebebebbbbbbbbbbbbbbeeeeeeeebbbbbbbbbbeebebebbeeeebeebbebbeeeebbbbeeebebebeeeeeebe:    
Contact         :                bbbbbb bb                                      bbbbb                                

queryA       215:PKYSVANDTGFVDI-PKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 313
                :*  *** ****    *  ***************** **** ** *** **********   ************   *** ********** ***  ****:
3kfq_A_1     102:PENSVAQDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSDNSKYWLVKNSWGPEWGSNGYVK: 201
SecStr          :GGGEEE  S EEE  TT HHHHHHHHHHT  EEEEE   SHHHHT  SSEE  TT  SS   EEEEEEEEEESSS TTSSEEEEEE SB TTSTBTTEEE:    
ExpBur          :eeeeebebebeeebeeeebeebbebbbebbbbbbbbbbeeeebeebeeeebebeebeeeeeebbbbbbbbbeeeeeeeeebbbbbbbbebeebbeebbbe:    
Contact         :                                           bb               bbbb                        b           

queryA       314:MAKDRRNHCGIASAASYPTV: 333
                : ***  ****** ***** *:
3kfq_A_1     202:IAKDKNNHCGIATAASYPNV: 221
SecStr          :EE SSSSGGGTTTS EEE  :    
ExpBur          :bbbeeebbbbbbeebbbbee:

Protein Model on 3kfq_A_1_D_1 (TEMPLATE: 3kfq )

Input Residue Numbers for Focused Sites