[pdbjlvh2]Protein Model on 3bc3_A_1_C

Protein Model on 3bc3_A_1_C_1 (TEMPLATE: 3bc3 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [215 aa]	Cathepsin L heavy and light chains :CATL_HUMAN
2	b		C 1 (A)	non-polymer(OPT)	S-benzyl-N-(biphenyl-4-ylacetyl)-L-cysteinyl-N~5~-(diaminomethyl)-D-ornithyl-N-(2-phenylethyl)-L-tyrosinamide	132Q 133G 136G 138C(U) 174G 176E 179N 180G 181G 182L 183M 248A 251A 252G 257L 274M 275D 276H 277G 302W 327A (identity: 95.2 %/97.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3bc3_A_1 identity=97.3%

queryA       114:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :************************ ***************************************************************************:
3bc3_A_1       1:APRSVDWREKGYVTPVKNQGQCGSUWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 100
SecStr          :  S EEGGGGT      B  SSB HHHHHHHHHHHHHHHHHHS    B HHHHHHH GGGT  TTB   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeeebbbeeeebbbeebebeebebebbbbbbbbbbbbbbeeeeeeeebbbbbbbbbbeebebebbeeeebbebbebbeeeebbbbbeebeeeeeeeeeee:    
Contact         :                  bb  b b                                   b b  bbbbb                              

queryA       214:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 313
                :**************************************************************************     *********************:
3bc3_A_1     101:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESXXXXXNKYWLVKNSWGEEWGMGGYVK: 200
SecStr          : GGGEEE  S EEE  S HHHHHHHHHHHSSEEEEE   SHHHHT  SSEE  TT  SS   EEEEEEEEEE  ----- EEEEEE SB SSSTBTTEEE:    
ExpBur          :eeeeeebebebeeebeeebebbeebbbebbbbbbbbbbeeeebeebeebebebeebbeeeeebbbbbbbbbeee-----eebbbbbbbebeebeeebbbb:    
Contact         :                                  b  bb    b                bbbb                        b           

queryA       314:MAKDRRNHCGIASAASYPTV: 333
                :********************:
3bc3_A_1     201:MAKDRRNHCGIASAASYPTV: 220
SecStr          :EE SSSSGGGTTTT EEE  :    
ExpBur          :bbbeeebbbbbbbebbbbee:    
Contact         :             b

Protein Model on 3bc3_A_1_C_1 (TEMPLATE: 3bc3 )

Input Residue Numbers for Focused Sites