[pdbjlvh2]Protein Model on 2vhs_A_1_B

Protein Model on 2vhs_A_1_B_1 (TEMPLATE: 2vhs )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [215 aa]	CATHSILICATEIN :CATL_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [215 aa]	CATHSILICATEIN :CATL_HUMAN	172P 174G 176E 181G 184D 185Y 227D 230K 270S 271S 272E(S) 319R 320N 326S (identity: 92.9 %/92.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2vhs_A_1 identity=92.6%

queryA       114:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :***********************   **************************************************************************:
2vhs_A_1       1:APRSVDWREKGYVTPVKNQGQCGASYAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 100
SecStr          :  S EEGGGGT      B TTSB HHHHHHHHHHHHHHHHHHS    B HHHHHHH TTTT  TTB   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeeebebeeeebbbebbebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbeebebebbeeeebbebbebbeeeebbbbbeebeeeeeeeeeee:    
Contact         :                                                          b b b    b  bb                            

queryA       214:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 313
                :********* ******************************************  ****    *  ******* *      ********************:
2vhs_A_1     101:NPKYSVANDVGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFSSDCSSSSLNHAMLVVGYGFISXX---QKYWLVKNSWGEEWGMGGYVK: 197
SecStr          : GGGEEE  SEEEE  SSHHHHHHHHHHT  EEEEE   SHHHHT  SSEE  TT  SS   EEEEEEEEEE  ----- EEEEEE SB TTSTBTTEEE:    
ExpBur          :eeeeeebebebeeebeeebebbeebbeebbbbbbbbbbeeeebeebeeeebebeebeeeeeebbbbbbbbbeee-----eebbbbbbbebeebeeebbbe:    
Contact         :             b  b                                       bbb                                         

queryA       314:MAKDRRNHCGIASAASYPTV: 333
                :********************:
2vhs_A_1     198:MAKDRRNHCGIASAASYPTV: 217
SecStr          :EE SSSSGGGTTTT EEEE :    
ExpBur          :bbbeeebbbbbbbebbbbee:    
Contact         :     bb     b

Protein Model on 2vhs_A_1_B_1 (TEMPLATE: 2vhs )

Input Residue Numbers for Focused Sites