[pdbjlvh2]Protein Model on 2nqd_B_1_E

Protein Model on 2nqd_B_1_E_1 (TEMPLATE: 2nqd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [221 aa]	Cathepsin L :CATL_HUMAN
2	b		E 1 (B)	non-polymer(CL)	CHLORIDE ION	179N (identity: 100.0 %/99.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2nqd_B_1 identity=99.5%

queryA       113:EAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCK: 212
                :************************* **************************************************************************:
2nqd_B_1       1:EAPRSVDWREKGYVTPVKNQGQCGSAWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCK: 100
SecStr          :   S EEGGGGT      B  SSB HHHHHHHHHHHHHHHHHHS    B HHHHHHH GGGT  TTB   HHHHHHHHHHHT EEBTTTS   SS     :    
ExpBur          :eeeeebbbeeeebbbebbebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbeebebebbeeeebeebbebbeeeebbbbbeebeeeeeeeeee:    
Contact         :                                                                  b                                 

queryA       213:YNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV: 312
                :****************************************************************************************************:
2nqd_B_1     101:YNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV: 200
SecStr          :  GGGEEE  S EEE  SSHHHHHHHHHHH SEEEEE   SHHHHT  SSEE  TT  SS   EEEEEEEEEE SS  SS EEEEEE SB TTSTBTTEE:    
ExpBur          :beeeeeebebebeeebeeebeebbebbbebbbbbbbbbbeeeebeebeeeebebeebebeeeebbbbbbbbbebeeeeeeeebbbbbbbebeebeeebbb:    

queryA       313:KMAKDRRNHCGIASAASYPTV: 333
                :*********************:
2nqd_B_1     201:KMAKDRRNHCGIASAASYPTV: 221
SecStr          :EEE SSSSGGGTTSS EEE  :    
ExpBur          :bbbbeeebbbbbbbebbbbee:

Protein Model on 2nqd_B_1_E_1 (TEMPLATE: 2nqd )

Input Residue Numbers for Focused Sites