[pdbjlvh2]Protein Model on 2hhn_A_1_B

Protein Model on 2hhn_A_1_B_1 (TEMPLATE: 2hhn )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [220 aa]	Cathepsin S :CATS_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [217 aa]	Cathepsin S :CATS_HUMAN	172P(E) 173Q(K) 174G 185Y(T) 188Q 225F(Y) 227D(E) 229P 231Q(R) 272E(Q) 273D(N) 327A(F) (identity: 25.0 %/57.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2hhn_A_1 identity=57.5%

queryA       115:PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ-GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :* ******** ** ** ** ** ****** **** *   *** * *** *******    ** ***** *  ****  ** * **  **** *    * *:
2hhn_A_1       5:PDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQY: 104
SecStr          : S EEGGGGT      B TTSB HHHHHHHHHHHHHHHHHHS    B HHHHHHHS GGGT  TTB   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeebbbeeeebbbebbebeebebbbbbbbbbbbbbbbeeeeeeeebbbbbbbbbbbeeebebebbeeeebbebbebbeeeebbbbeeebebeeeeeeeee:    
Contact         :                                                         bbbb          b  b                         

queryA       214:NPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV: 312
                :  **  *        *   *  *  ***  ** **  ** * **  *  * * ** *      *********          *********   *  ** :
2hhn_A_1     105:DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC-TQNVNHGVLVVGYG----DLNGKEYWLVKNSWGHNFGEEGYI: 199
SecStr          : GGGEEE   EEEE  TT HHHHHHHHHHT  EEEEE   SHHHHH  SSEE  TT - S   EEEEEEEEE----EETTEEEEEEE SB TTSTBTTEE:    
ExpBur          :eeeeeebebeeeeebeebebebbbebbbeebbbbbbbbbebeebeebeeeebebeeb-eeeeebbbbbbbbb----eeeeeebbbbbbbebeebbeebbb:    
Contact         :           b b bb b                                        bb                                       

queryA       313:KMAKDRRNHCGIASAASYPTV: 333
                : **    *******  ***  :
2hhn_A_1     200:RMARNKGNHCGIASFPSYPEI: 220
SecStr          :EEE SSSSGGGTTTS EEEE :    
ExpBur          :bbbbeeebbbbbbbebbbbee:    
Contact         :              b

Protein Model on 2hhn_A_1_B_1 (TEMPLATE: 2hhn )

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