Protein Model on 1nl6_A_1_C_1 (TEMPLATE: 1nl6 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(CATL1_HUMAN) A 1 (A) polymer(polypeptide(L)) [215 aa] Cathepsin K :CATK_HUMAN
2 b C 1 (A) non-polymer(750) 5-(2-MORPHOLIN-4-YLETHOXY)BENZOFURAN-2-CARBOXYLIC ACID ((S)-3-METHYL-1-{(S)-3-OXO-1-[2-(3-PYRIDIN-2-YLPHENYL)ACETYL]AZEPAN-4-YLCARBAMOYL}BUTYL)AMIDE 132Q 133G 135C 136G 137S 138C 139W 171G(S) 172P(E) 176E(D) 179N(G) 180G 181G 182L(Y) 248A 274M(L) 275D(N) 276H 302W 306W (identity: 65.0 %/60.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1nl6_A_1 identity=60.3%
queryA       114:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :** *** * ********************  ******   *** *  ** ******     * ** ** *  ****** * * ***  ***   **** *:
1nl6_A_1       1:APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMY:  98
SecStr          :  S EEHHHHT      B  SS  HHHHHHHHHHHHHHHHHHS    B HHHHHHH TT--S GGG   SHHHHHHHHHHT   BTTTS   SS      :    
ExpBur          :eeeeebbeeeebbbebeebeebebbbbbbbbbbbbbbbbeeeeeeeebbbbbbbbbbee--bebbeeeebeebbebbeeeebbbbeeebeeebeeeeeeb:    
Contact         :                  bb bbbbb                               bb   b  bbbb                               

queryA       214:NPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV: 312
                :**    *   *   **   ****  *** *** ******   ** **  * *    * *    * ** ****        ** *  ****** **  ** :
1nl6_A_1      99:NPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQK----GNKHWIIKNSWGENWGNKGYI: 194
SecStr          : GGG     S EEE  TT HHHHHHHHHHH  EEEEE   SHHHHT  SSEE  TT  TT   EEEEEEEEEESS----S EEEEEE SB TTSTBTTEE:    
ExpBur          :eeebeebebebeeebeeeebeebeebbbebbbbbbbbbbebeebeebeeeebeeeebeeeeeebbbbbbbbbeee----eeebbbbbbbebeebeeebbb:    
Contact         :                                   b                         bbb                         b   b      

queryA       313:KMAKDRRNHCGIASAASYPTV: 333
                : **    * ****  ** *  :
1nl6_A_1     195:LMARNKNNACGIANLASFPKM: 215
SecStr          :EEESSSSSGGGTTSS EEE  :    
ExpBur          :bbbbeeebbbbbbbebbbbee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123