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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | A 1 (A) | polymer(polypeptide(L)) [314 aa] | Papain-like protease :R1A_SARS2 | |
2 | b | E 1 (A) | non-polymer(CL) | CHLORIDE ION | 1775S 1776Y 1777E 1868Y (identity: 100.0 %/99.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7m1y_A_1 identity=99.7% |
queryA 1565:VRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGL:1664 :****************************************************************************************************: 7m1y_A_1 5:VRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGL: 104 SecStr : EEEEEEESSSSS EEEEEETTS SHHHHSSEEETTEE TT GGGTT EEEE SHHHHHHHHHHHS TTHHHHHHHHHHHHTTS EETTE: ExpBur :eeebebebbbbeeeeeeeebebeebbeeebeebbbebeebbeeebeeebeeeebbbebeeeebeebbeebbebeeeebbbebbebbeebeebebeebeeb: queryA 1665:TSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG:1764 :********* ******************************************************************************************: 7m1y_A_1 105:TSIKWADNNSYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG: 204 SecStr :E TT HHHHHHHHHHTTS BSSHHHHHHHHHHHHT HHHHHHHHHHHT TT HHHHHHHHHHTBS TT EEEEEEEETTTEEEEEEEEG: ExpBur :bbbeeeeebbbbbbbbbbbbbbebebebebbbebbeebeebebbebbbbbbbbbebebeeebebeebbeebbeebebeebebbbbeebeeeeeeeeeeeb: queryA 1765:VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPIT:1864 :****************************************************************************************************: 7m1y_A_1 205:VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPIT: 304 SecStr :GGGTEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEESEEEEEEE: ExpBur :bebbbbeeebbbeebbebbeeebeeeeebebbbbebebebbbbbbeeeeeebeeeebbbbbbbeeeeeebebebbbbeebbbbbbbeeeeeeeebebbbb: Contact : bbb queryA 1865:DVFYKENSYTTTIK:1878 :**************: 7m1y_A_1 305:DVFYKENSYTTTIK: 318 SecStr :EEEEE SEEE : ExpBur :bbbbebeebebeee: Contact : b |