CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | D 1 (D) | polymer(polypeptide(L)) [307 aa] | Non-structural protein 3 :R1AB_SARS2 | |
2 | b | O 1 (D) | non-polymer(TTT) | 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide | 1725L 1726G 1727D 1811P 1827Y 1831Y 1832Q 1836Y 1864T (identity: 100.0 %/97.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7cmd_D_1 identity=97.1% |
queryA 1564:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG:1663 :****************************************************************************************************: 7cmd_D_1 2:EVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG: 101 SecStr : EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE TTS STTTT EEEE SHHHHHHHHHHHS TTHHHHHHHHHHHHTTS EETT: ExpBur :eeeebebebbbbeeeeeeeebbbeeebeeebeebbbebeebeeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbbbbbebbeebeebebeebee: queryA 1664:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK:1763 :****************************************************************************************************: 7cmd_D_1 102:LTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLK: 201 SecStr :EE TTTHHHHHHHHHHTTS BSSHHHHHHHHHHTTT HHHHHHHHHHTT TT HHHHHHHHHHTB S EEEEEEE SSS EEEEEEE: ExpBur :bbbbeeeeebbbbbbbbbbbbbbebebebebbeebbeebeebebbebbbbbbbbbebeeeebbebeebbeebbeebebeebebbbbeeeeeeeeeeeeee: Contact : bbb queryA 1764:GVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI:1863 :********************* **********************************************************************: 7cmd_D_1 202:GVEAVMYMGTLSYEQFKKGVQXXXXXXXXXTKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI: 301 SecStr :GGGGSEEES S HHHHHH B --------- EEEEEEESSEEEEEEEEEEEEEETTS SEEEEEESSTTT EEEEEEESSSEEEEETTEEEEESEEEEEE: ExpBur :bbebbbbeeebbbeebbebbe---------eebbbebebbbbbbbbeeeeeebeeeebbbbbbbeeeeeebebebbbbeeebbbbbbeeeeeeeebebbb: Contact : b b bb b queryA 1864:TDVFYKENSYTTTIK:1878 :***************: 7cmd_D_1 302:TDVFYKENSYTTTIK: 316 SecStr :EEEEEE SEEE : ExpBur :bbbbbeeeeeebeee: Contact :b |