[pdbjlvh2]Protein Model on 7cjd_D_1_B

Protein Model on 7cjd_D_1_B_1 (TEMPLATE: 7cjd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS2)	D 1 (C)	polymer(polypeptide(L)) [310 aa]	Non-structural protein 3 :R1AB_SARS2
2	b		B 1 (A)	polymer(polypeptide(L)) [297 aa]	Non-structural protein 3 :R1AB_SARS2	1606K 1652H 1655K 1669W 1671D 1672N 1722V 1723G 1724E 1725L 1830N 1832Q 1833C 1835H (identity: 100.0 %/99.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7cjd_D_1 identity=99.7%

queryA      1566:RTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT:1665
                :****************************************************************************************************:
7cjd_D_1       4:RTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT: 103
SecStr          :  EEEEEESSSS  EEEEE SSS HHHHHSSEEETTEE TT    SS TT EEEE   SHHHHHHHHHHHS   TTHHHHHHHHHHHHTTS   EETTEE:    
ExpBur          :eebebebbbbeeeeeeeebeeeebbbeebeebbbebeebeeeebeeebeeeebbbebeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebb:    
Contact         :                                        b                                             b  b          

queryA      1666:SIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGV:1765
                :******** *******************************************************************************************:
7cjd_D_1     104:SIKWADNNSYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGV: 203
SecStr          :   S TT HHHHHHHHHHTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHTT  TTS   HHHHHHHHHHSB  TT EEEEEE  SSSS EEEEEEGG:    
ExpBur          :bbeebeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbebbbbbbbbbebebeeebebeebbeebbeebebeebebbbbbeebeeeeeeeeeebe:    
Contact         :   b bb                                                 bbbb                                        

queryA      1766:EAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITD:1865
                :****************************************************************************************************:
7cjd_D_1     204:EAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITD: 303
SecStr          :GGGEEES S HHHHHT EEEE TTS EEEEEEEEEESSEEEEE S  EEEEETTS SEEEEEES STT EEEEEEESSSEEEEETTEEEEESEEEEEEEE:    
ExpBur          :ebbbbeebbbbeebeebbeeebeeeeebebbbbebebebbbbbbeeeeeebeeeebbbbbbbeeeeeebebebbbbeebbbbbbbeeeeeeeebebbbbb:    
Contact         :                                                                b bb b                              

queryA      1866:VFYKENSYTT:1875
                :**********:
7cjd_D_1     304:VFYKENSYTT: 313
SecStr          :EEEE S EE :    
ExpBur          :bbbebeebee:

Protein Model on 7cjd_D_1_B_1 (TEMPLATE: 7cjd )

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