[pdbjlvh2]Protein Model on 7awu_A_1_B

Protein Model on 7awu_A_1_B_1 (TEMPLATE: 7awu )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS2)	A 1 (A)	polymer(polypeptide(L)) [306 aa]	3C-like proteinase :R1AB_SARS2
2	b		B 1 (A)	non-polymer(S8B)	~{N}-propan-2-yl-5-(2-pyridin-4-ylethynyl)pyridine-2-carboxamide	3309S 3403F 3404L 3405N 3407S 3408C(U) 3426H 3427H 3428M 3429E 3452Q (identity: 90.9 %/99.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7awu_A_1 identity=99.7%

queryA      3264:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK:3363
                :****************************************************************************************************:
7awu_A_1       1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr          :          HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  TTGGGS  HHHHHHT  GGGEEEEETTEEE EEEEEEETTEEEEEESS  TT  E:    
ExpBur          :eebeeeebebeebeebbbebebeeeebbbbbbeeebbbbebbbbeeeeeeebebeeeeeeeeeeebebebeeeebebebeeeeebbbebebeeebeeebe:    
Contact         :                                             b                                                      

queryA      3364:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI:3463
                :******************************************** *******************************************************:
7awu_A_1     101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSUGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr          :EEE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT  SSSS        B :    
ExpBur          :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeebbebbbbbebeeebbebbbbbbeebeeeebbbbbbebebbeebebeeeeeeeeeeeeb:    
Contact         :                                       bbb bb                 bbbb                      b           

queryA      3464:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC:3563
                :****************************************************************************************************:
7awu_A_1     201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr          :HHHHHHHHHHHHHTT  TT  S    HHHHHHHHHHTTB    HHHHHHTHHHHHHH   HHHHHHHHHHHHHH  TT  BTTBSS      HHHHHHHH:    
ExpBur          :bbbbbbbbbbbbeeeeeebeeeeebeeeebeebbeeeebeebeeeeeeebeebeeeeeeebeebbbbbeebeeeebeeeebeeeeeeebbbbbebbeeee:    

queryA      3564:SGVTFQ:3569
                :******:
7awu_A_1     301:SGVTFQ: 306
SecStr          :HT    :    
ExpBur          :eeeeee:

Protein Model on 7awu_A_1_B_1 (TEMPLATE: 7awu )

Input Residue Numbers for Focused Sites