#WARNING:no index is registered index "YP_009725310.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725310.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 5s6y_A_1_B_5

Protein Model on 5s6y_A_1_B_5 (TEMPLATE: 5s6y )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [348 aa] Uridylate-specific endoribonuclease :R1AB_SARS2
2 b B 5 (B) polymer(polypeptide(L)) [348 aa] Uridylate-specific endoribonuclease :R1AB_SARS2 1S 2L 3E 21E 23P 24V 25S 26I 27I 34K 50P 51V 52N 53V 103S 104M (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5s6y_A_1 identity=100.0%
queryA         1:SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG: 100
                :****************************************************************************************************:
5s6y_A_1       4:SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG: 103
SecStr          : HHHHHHHHHHHSS  S      EEEETTEEEEEETTEEEEEEE  SSS HHHHHHHHHTB  S B  HHHHHHTT  EESSSB EETTTTEESSSSEES:    
ExpBur          :eeebbbebbeeeebbeeeeeebebeeeeebbebeeeeeeeebbebebeeebebbbbbbbbbbeebbbbbbbbeebebebbbebbbbbeeeebbbbeebbe:    
Contact         :bbb                 b bbbbb      b               bbbb                                               

queryA       101:VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNL: 200
                :****************************************************************************************************:
5s6y_A_1     104:VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNL: 203
SecStr          :S TTTEEESSTTSGGGTTS EEEETTSTTHHHHHHH SSEEEEESS  TT   EE  SEEEETTEEEE SSS    EEEEESSSSEE     B B    S:    
ExpBur          :bbeebeebeebeeeebeeebbbbbebeeebeeebeebebbbbbbeeebeebeebebbebbbeeeeeeeeeeeebebbbbbbeeeeeeebeeeebbbbbeb:    
Contact         :  bb                                                                                                

queryA       201:QEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD: 300
                :****************************************************************************************************:
5s6y_A_1     204:QEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD: 303
SecStr          :TT    SHHHHHHHHS HHHHHHHTT TTTTHHHHTT B SSSB B   BHHHHHHHHHHS EEEE SS S  SEEEEEEEETTT  EEEEEEEE B HH:    
ExpBur          :eebeeebebbebbeebeeeebbeebebeebbbeebbbbebeeeebbbbbbbbbbbbeeeebebeeeeeeeebebbbebebebeeeebebeebbbbbbbbe:    

queryA       301:DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQ: 346
                :**********************************************:
5s6y_A_1     304:DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQ: 349
SecStr          :HHHHHHHTS   SSEEEEEEEETTEEEEEEEEEETTEEEEEEE   :    
ExpBur          :ebbebbeeeebeeeeeebebbbbbeebbbbbebeeeebebbebeee:    


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